Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 U3.13-201ENST00000364804 214 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 VTRNA1-3-201ENST00000365645 89 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNU6-72P-201ENST00000384285 79 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNU6-1060P-201ENST00000384664 107 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 MIR578-201ENST00000384828 96 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AL591034.2-201ENST00000402839 359 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNU6-607P-201ENST00000411283 108 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AL031779.1-201ENST00000415663 330 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A1P02462 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A1P02462 SDAD1P3-201ENST00000427380 333 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A1P02462 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.92□□□□□ -2.26
COL4A1P02462 AC073614.1-201ENST00000438690 650 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AC243964.1-201ENST00000441814 261 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 CYP2C59P-201ENST00000457790 269 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNA5SP269-201ENST00000459032 137 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 HMGB1P30-201ENST00000492455 606 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AC098862.1-201ENST00000504991 413 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 MTCYBP40-201ENST00000509390 1135 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.92□□□□□ -2.26
COL4A1P02462 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A1P02462 RNU1-86P-201ENST00000516108 154 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNU2-53P-201ENST00000516257 147 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNU1-107P-201ENST00000516617 154 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNU6-232P-201ENST00000517144 64 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.92□□□□□ -2.26
COL4A1P02462 AC107953.1-201ENST00000522216 297 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AC026271.5-201ENST00000577873 130 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 MIR548AB-201ENST00000584917 84 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AL353778.1-201ENST00000603149 408 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 Z99497.2-201ENST00000603634 310 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 NDUFA8P1-201ENST00000605525 367 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AC012409.4-201ENST00000612923 249 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AL359314.1-201ENST00000616913 261 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 U4atac.1-201ENST00000618345 95 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RMST_7.1-201ENST00000621935 268 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 AC091925.1-201ENST00000623204 462 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNU6-1097P-201ENST00000363586 107 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 RNU6-1210P-201ENST00000363775 107 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 RNU11-3P-201ENST00000391111 133 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 RNA5SP193-201ENST00000410353 107 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 RNU2-63P-201ENST00000410792 194 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.91□□□□□ -2.26
COL4A1P02462 CALM2P2-201ENST00000428512 440 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC098934.3-201ENST00000430450 190 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 RPS24P1-201ENST00000438550 371 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.91□□□□□ -2.26
COL4A1P02462 RNU1-98P-201ENST00000458992 160 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC116562.3-201ENST00000506136 177 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A1P02462 RNU6-123P-201ENST00000516163 102 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 Y_RNA.687-201ENST00000516558 91 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 RNU6-1220P-201ENST00000517126 108 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC068587.5-201ENST00000528506 175 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A1P02462 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A1P02462 MIR3198-2-201ENST00000577868 80 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 MIR4775-201ENST00000581168 75 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AL590229.1-201ENST00000603497 542 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.91□□□□□ -2.26
COL4A1P02462 AC087683.2-201ENST00000611384 326 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 MIR8087-201ENST00000612745 78 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC008250.2-201ENST00000615261 205 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AP001506.1-201ENST00000615444 211 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC072046.2-201ENST00000618366 268 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AL390237.1-201ENST00000404226 1415 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
COL4A1P02462 AC008163.1-202ENST00000636004 2889 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
COL4A1P02462 RNU6-546P-201ENST00000383991 107 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
COL4A1P02462 RNU6-387P-201ENST00000411331 105 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A1P02462 AL158823.1-201ENST00000418441 478 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC244636.1-201ENST00000421152 228 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC096920.1-201ENST00000423991 241 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AL591043.1-201ENST00000432461 424 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A1P02462 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.91□□□□□ -2.26
COL4A1P02462 MTND2P4-201ENST00000445034 1004 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC079448.1-201ENST00000449377 373 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AL353752.1-201ENST00000454946 260 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 RNU6-333P-201ENST00000459117 107 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 RAP1BP2-201ENST00000478270 544 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.91□□□□□ -2.26
COL4A1P02462 AC005178.1-201ENST00000508392 440 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 SNORA43.2-201ENST00000516652 128 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.91□□□□□ -2.26
COL4A1P02462 AP003072.2-201ENST00000527756 676 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.91□□□□□ -2.26
COL4A1P02462 AC008269.2-201ENST00000561915 1105 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A1P02462 AC063944.3-201ENST00000609969 533 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AL360219.1-201ENST00000610230 366 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 MIR6513-201ENST00000621188 64 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 AC009161.2-201ENST00000624626 138 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms