Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MIR5701-1-201ENST00000585138 82 ntBASIC2.62□□□□□ -1.99
LDB3O75112 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.62□□□□□ -1.99
LDB3O75112 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
LDB3O75112 RAC1P9-201ENST00000604990 392 ntBASIC2.62□□□□□ -1.99
LDB3O75112 AL021879.1-201ENST00000611756 288 ntBASIC2.62□□□□□ -1.99
LDB3O75112 MIR5701-2-201ENST00000615634 82 ntBASIC2.62□□□□□ -1.99
LDB3O75112 U2.1-201ENST00000618978 145 ntBASIC2.62□□□□□ -1.99
LDB3O75112 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.62□□□□□ -1.99
LDB3O75112 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.62□□□□□ -1.99
LDB3O75112 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
LDB3O75112 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
LDB3O75112 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.61□□□□□ -1.99
LDB3O75112 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LDB3O75112 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LDB3O75112 RNU6-78P-201ENST00000362897 107 ntBASIC2.61□□□□□ -1.99
LDB3O75112 RNU6-379P-201ENST00000363813 104 ntBASIC2.61□□□□□ -1.99
LDB3O75112 Y_RNA.188-201ENST00000363952 111 ntBASIC2.61□□□□□ -1.99
LDB3O75112 Y_RNA.214-201ENST00000364201 112 ntBASIC2.61□□□□□ -1.99
LDB3O75112 RNU6-1026P-201ENST00000384465 108 ntBASIC2.61□□□□□ -1.99
LDB3O75112 AC096649.2-201ENST00000416186 393 ntBASIC2.61□□□□□ -1.99
LDB3O75112 MTCO3P29-201ENST00000432119 779 ntBASIC2.61□□□□□ -1.99
LDB3O75112 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.61□□□□□ -1.99
LDB3O75112 AC013470.1-201ENST00000453438 462 ntBASIC2.61□□□□□ -1.99
LDB3O75112 AC079354.2-201ENST00000453523 154 ntBASIC2.61□□□□□ -1.99
LDB3O75112 RPL31P41-201ENST00000477967 372 ntBASIC2.61□□□□□ -1.99
LDB3O75112 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.61□□□□□ -1.99
LDB3O75112 ACA59.1-201ENST00000515966 143 ntBASIC2.61□□□□□ -1.99
LDB3O75112 RNU6-581P-201ENST00000516214 105 ntBASIC2.61□□□□□ -1.99
LDB3O75112 RNA5SP367-201ENST00000516557 118 ntBASIC2.61□□□□□ -1.99
LDB3O75112 SNORA43.2-201ENST00000516652 128 ntBASIC2.61□□□□□ -1.99
LDB3O75112 SNORD19.2-201ENST00000516978 73 ntBASIC2.61□□□□□ -1.99
LDB3O75112 AC022616.4-201ENST00000522985 181 ntBASIC2.61□□□□□ -1.99
LDB3O75112 AC079600.2-201ENST00000550076 130 ntBASIC2.61□□□□□ -1.99
LDB3O75112 AC006600.1-201ENST00000572529 153 ntBASIC2.61□□□□□ -1.99
LDB3O75112 MIR5696-201ENST00000578474 85 ntBASIC2.61□□□□□ -1.99
LDB3O75112 LARP7P3-201ENST00000579888 337 ntBASIC2.61□□□□□ -1.99
LDB3O75112 MIR3668-201ENST00000582138 75 ntBASIC2.61□□□□□ -1.99
LDB3O75112 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.61□□□□□ -1.99
LDB3O75112 MIR4506-201ENST00000584693 77 ntBASIC2.61□□□□□ -1.99
LDB3O75112 AL033523.1-201ENST00000605153 153 ntBASIC2.61□□□□□ -1.99
LDB3O75112 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.61□□□□□ -1.99
LDB3O75112 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.61□□□□□ -1.99
LDB3O75112 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.61□□□□□ -1.99
LDB3O75112 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.61□□□□□ -1.99
LDB3O75112 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
LDB3O75112 AC138915.1-201ENST00000565427 1685 ntBASIC2.6□□□□□ -1.99
LDB3O75112 Y_RNA.64-201ENST00000362845 102 ntBASIC2.6□□□□□ -1.99
LDB3O75112 Y_RNA.105-201ENST00000363182 111 ntBASIC2.6□□□□□ -1.99
LDB3O75112 RNU1-112P-201ENST00000364401 164 ntBASIC2.6□□□□□ -1.99
LDB3O75112 SNORD14.1-201ENST00000365609 90 ntBASIC2.6□□□□□ -1.99
LDB3O75112 Y_RNA.424-201ENST00000384063 103 ntBASIC2.6□□□□□ -1.99
LDB3O75112 MT-TG-201ENST00000387429 68 ntBASIC2.6□□□□□ -1.99
LDB3O75112 RNU6-750P-201ENST00000390946 107 ntBASIC2.6□□□□□ -1.99
LDB3O75112 AL591034.2-201ENST00000402839 359 ntBASIC2.6□□□□□ -1.99
LDB3O75112 MIR1252-201ENST00000408861 65 ntBASIC2.6□□□□□ -1.99
LDB3O75112 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.6□□□□□ -1.99
LDB3O75112 AL161651.1-201ENST00000440882 223 ntBASIC2.6□□□□□ -1.99
LDB3O75112 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.6□□□□□ -1.99
LDB3O75112 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.6□□□□□ -1.99
LDB3O75112 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.6□□□□□ -1.99
LDB3O75112 AC097462.2-201ENST00000504623 481 ntBASIC2.6□□□□□ -1.99
LDB3O75112 SEM1P1-201ENST00000506694 209 ntBASIC2.6□□□□□ -1.99
LDB3O75112 MTND1P19-201ENST00000511780 315 ntBASIC2.6□□□□□ -1.99
LDB3O75112 RNA5SP385-201ENST00000515947 110 ntBASIC2.6□□□□□ -1.99
LDB3O75112 RNU6-397P-201ENST00000516226 104 ntBASIC2.6□□□□□ -1.99
LDB3O75112 RNA5SP76-201ENST00000516277 87 ntBASIC2.6□□□□□ -1.99
LDB3O75112 RN7SKP282-201ENST00000516824 299 ntBASIC2.6□□□□□ -1.99
LDB3O75112 RNU6-794P-201ENST00000517261 64 ntBASIC2.6□□□□□ -1.99
LDB3O75112 AC023442.1-201ENST00000531247 422 ntBASIC2.6□□□□□ -1.99
LDB3O75112 AC010186.2-204ENST00000537668 439 ntBASIC2.6□□□□□ -1.99
LDB3O75112 CR383656.8-201ENST00000549046 145 ntBASIC2.6□□□□□ -1.99
LDB3O75112 AC090517.1-201ENST00000569307 266 ntBASIC2.6□□□□□ -1.99
LDB3O75112 AL355297.3-201ENST00000604082 446 ntBASIC2.6□□□□□ -1.99
LDB3O75112 AC005046.1-201ENST00000608515 625 ntBASIC2.6□□□□□ -1.99
LDB3O75112 AC007792.1-201ENST00000623023 402 ntBASIC2.6□□□□□ -1.99
LDB3O75112 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
LDB3O75112 AC004944.1-201ENST00000517807 3059 ntBASIC2.6□□□□□ -1.99
LDB3O75112 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.59□□□□□ -1.99
LDB3O75112 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -1.99
LDB3O75112 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LDB3O75112 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
LDB3O75112 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LDB3O75112 RNU6-336P-201ENST00000364891 107 ntBASIC2.59□□□□□ -1.99
LDB3O75112 Y_RNA.483-201ENST00000384380 101 ntBASIC2.59□□□□□ -1.99
LDB3O75112 RNU6-933P-201ENST00000384424 107 ntBASIC2.59□□□□□ -1.99
LDB3O75112 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
LDB3O75112 FTH1P15-201ENST00000406984 280 ntBASIC2.59□□□□□ -1.99
LDB3O75112 RNA5SP494-201ENST00000410653 129 ntBASIC2.59□□□□□ -1.99
LDB3O75112 RN7SKP123-201ENST00000410732 291 ntBASIC2.59□□□□□ -1.99
LDB3O75112 RNU6-130P-201ENST00000411112 103 ntBASIC2.59□□□□□ -1.99
LDB3O75112 AC092423.1-201ENST00000430165 186 ntBASIC2.59□□□□□ -1.99
LDB3O75112 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.59□□□□□ -1.99
LDB3O75112 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -1.99
LDB3O75112 MRPL42P6-201ENST00000486397 371 ntBASIC2.59□□□□□ -1.99
LDB3O75112 AK3P2-201ENST00000507976 429 ntBASIC2.59□□□□□ -1.99
LDB3O75112 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.59□□□□□ -1.99
LDB3O75112 MRPS36P2-201ENST00000512569 299 ntBASIC2.59□□□□□ -1.99
LDB3O75112 RN7SKP132-201ENST00000516001 208 ntBASIC2.59□□□□□ -1.99
LDB3O75112 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.59□□□□□ -1.99
LDB3O75112 RNU6-388P-201ENST00000517012 105 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms