Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CACNA1FO60840 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1FO60840 DEFB108F-201ENST00000344638 222 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 CD24P4-201ENST00000382840 243 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-1040P-201ENST00000383974 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CACNA1FO60840 RPL23AP50-201ENST00000434149 455 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RPL37P6-201ENST00000460682 294 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 Y_RNA.676-201ENST00000516393 96 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-143P-201ENST00000516942 93 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AC025755.1-201ENST00000521306 278 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AC025423.5-201ENST00000550230 219 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 MTCO3P23-201ENST00000561363 289 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 CPDP1-201ENST00000579660 283 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AL049779.4-201ENST00000604500 156 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AL161629.2-201ENST00000615347 275 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CACNA1FO60840 AL031601.2-202ENST00000622650 282 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AC008568.2-201ENST00000623862 2313 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AC009812.4-201ENST00000569134 1805 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-37P-201ENST00000362692 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-562P-201ENST00000362731 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 Y_RNA.202-201ENST00000364083 110 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-11P-201ENST00000364234 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 SNORA23-201ENST00000365128 182 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-25P-201ENST00000383873 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-1-201ENST00000383898 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-48P-201ENST00000384161 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-36P-201ENST00000384172 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-4P-201ENST00000384205 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-5P-201ENST00000384238 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-3P-201ENST00000384314 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-16P-201ENST00000384385 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-15P-201ENST00000384534 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-2-201ENST00000384627 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-29P-201ENST00000384637 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 Y_RNA.557-201ENST00000384680 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-9-201ENST00000384776 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-33P-201ENST00000384793 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 SNORA40.18-201ENST00000391200 128 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AC092809.3-201ENST00000415453 231 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AL592045.1-201ENST00000429867 352 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.41□□□□□ -2.02
CACNA1FO60840 AL360271.2-201ENST00000447710 161 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AL031274.1-201ENST00000450334 232 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.41□□□□□ -2.02
CACNA1FO60840 MTND5P22-201ENST00000458380 195 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNA5SP310-201ENST00000459084 116 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 HMGB1P30-201ENST00000492455 606 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-1282P-201ENST00000516735 96 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 RN7SKP295-201ENST00000517264 153 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 HSPE1P18-201ENST00000517602 280 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 AC005899.2-201ENST00000584353 90 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CACNA1FO60840 RNU6-6P-201ENST00000606623 107 ntBASIC2.41□□□□□ -2.02
CACNA1FO60840 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CACNA1FO60840 Y_RNA.80-201ENST00000362996 102 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 RNU6-1309P-201ENST00000363305 108 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 Y_RNA.395-201ENST00000383945 109 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 Y_RNA.485-201ENST00000384395 102 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 RNU6-817P-201ENST00000391083 104 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 AL590632.1-201ENST00000424289 371 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 AC092047.1-201ENST00000424997 240 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 AL356867.1-201ENST00000429623 299 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 AL627311.1-201ENST00000431514 115 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 RPS29P12-201ENST00000460178 152 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 AC090515.1-201ENST00000465295 476 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 SCARNA16.2-201ENST00000516520 172 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 RNU6-914P-201ENST00000516749 109 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 RNU6-699P-201ENST00000517081 110 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 AC022634.1-201ENST00000520765 532 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.4□□□□□ -2.02
CACNA1FO60840 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.4□□□□□ -2.02
CACNA1FO60840 AC011494.1-201ENST00000596454 237 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 SNORD58B-201ENST00000607313 66 ntBASIC2.4□□□□□ -2.02
CACNA1FO60840 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.4□□□□□ -2.02
CACNA1FO60840 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.4□□□□□ -2.02
CACNA1FO60840 AC005592.1-201ENST00000566527 1640 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 AC138393.1-203ENST00000327086 343 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 Y_RNA.28-201ENST00000362554 111 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 Y_RNA.245-201ENST00000364493 95 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 RNU6-395P-201ENST00000365662 106 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 Y_RNA.482-201ENST00000384377 111 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 Y_RNA.534-201ENST00000384599 112 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 Y_RNA.645-201ENST00000391229 102 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 Y_RNA.594-201ENST00000410373 140 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 AL358176.2-201ENST00000425769 204 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 USP9YP30-201ENST00000430729 455 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 AIG1P1-201ENST00000503376 148 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 AC097473.1-201ENST00000508142 408 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 SNORA70.16-201ENST00000516390 95 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 AC073539.2-201ENST00000597113 165 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 ELOCP5-201ENST00000604924 333 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CACNA1FO60840 AL353748.2-201ENST00000622148 471 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 Z99571.1-201ENST00000636677 394 ntBASIC2.4□□□□□ -2.03
CACNA1FO60840 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms