Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SNORA19.2-201ENST00000516013 114 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 RNU5F-2P-201ENST00000516066 82 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.9□□□□□ -2.11
LCMT2O60294 NDUFA5P6-201ENST00000542110 379 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.9□□□□□ -2.11
LCMT2O60294 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.9□□□□□ -2.11
LCMT2O60294 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 SNRPGP17-201ENST00000603780 214 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 AC009314.1-201ENST00000603871 304 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
LCMT2O60294 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.89□□□□□ -2.11
LCMT2O60294 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCMT2O60294 Y_RNA.9-201ENST00000362354 101 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 RNU6-332P-201ENST00000391193 108 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 SNORD115-47-201ENST00000391226 86 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 AC010095.1-201ENST00000443543 144 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 HMGN2P26-201ENST00000463169 339 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.89□□□□□ -2.11
LCMT2O60294 HSPE1P18-201ENST00000517602 280 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.89□□□□□ -2.11
LCMT2O60294 AC104576.1-201ENST00000524225 88 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.89□□□□□ -2.11
LCMT2O60294 AC068790.6-201ENST00000602558 258 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 AL670379.2-201ENST00000604983 252 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 AC068944.2-201ENST00000610373 403 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
LCMT2O60294 AC090517.2-201ENST00000614966 680 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 AC121333.1-201ENST00000567488 2709 ntBASIC1.89□□□□□ -2.11
LCMT2O60294 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCMT2O60294 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
LCMT2O60294 SNORD115-3-201ENST00000363100 82 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 RNU6-944P-201ENST00000364023 107 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 Y_RNA.373-201ENST00000365600 103 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 SNORA40.19-201ENST00000390846 128 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 EIF4E2P1-201ENST00000393781 255 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 RNU2-32P-201ENST00000411193 191 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 ARL5AP1-201ENST00000418991 388 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 MTCO2P3-201ENST00000442543 421 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
LCMT2O60294 AC092436.3-201ENST00000511788 257 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 AC087854.1-201ENST00000519706 414 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.88□□□□□ -2.11
LCMT2O60294 AP000763.2-201ENST00000540641 163 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 ZNF519P2-201ENST00000557032 169 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.88□□□□□ -2.11
LCMT2O60294 VN1R107P-201ENST00000601784 209 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCMT2O60294 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 AC063943.3-201ENST00000615562 356 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.88□□□□□ -2.11
LCMT2O60294 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.88□□□□□ -2.11
LCMT2O60294 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LCMT2O60294 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCMT2O60294 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
LCMT2O60294 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.87□□□□□ -2.11
LCMT2O60294 Y_RNA.89-201ENST00000363031 102 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 RNU6-1329P-201ENST00000365664 107 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCMT2O60294 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LCMT2O60294 RNU2-48P-201ENST00000410694 191 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.87□□□□□ -2.11
LCMT2O60294 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.87□□□□□ -2.11
LCMT2O60294 AL121890.1-201ENST00000435457 205 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 AL353689.1-201ENST00000438895 199 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.87□□□□□ -2.11
LCMT2O60294 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.87□□□□□ -2.11
LCMT2O60294 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
LCMT2O60294 RPL23AP3-201ENST00000453844 468 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 AC011352.1-201ENST00000512300 793 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 RNU6-718P-201ENST00000516166 105 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
LCMT2O60294 AC243960.4-201ENST00000600532 288 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 AP001836.1-201ENST00000604675 523 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 U4.5-201ENST00000617137 123 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 MIR3688-2-201ENST00000636963 87 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 AC073869.6-201ENST00000640656 341 ntBASIC1.87□□□□□ -2.11
LCMT2O60294 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LCMT2O60294 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LCMT2O60294 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
LCMT2O60294 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
LCMT2O60294 RNU6-1252P-201ENST00000363054 104 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 RNU6-254P-201ENST00000363377 107 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 RNU6-1141P-201ENST00000364520 107 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 RNU6-534P-201ENST00000364877 106 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LCMT2O60294 MIR450B-201ENST00000401182 78 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.86□□□□□ -2.11
LCMT2O60294 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 USP9YP18-201ENST00000425912 695 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 RPS15AP10-201ENST00000432472 382 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 MTND1P34-201ENST00000438556 671 ntBASIC1.86□□□□□ -2.11
LCMT2O60294 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms