Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HMGB1P33-201ENST00000563485 527 ntBASIC1.33□□□□□ -2.2
RNF13O43567 SUB1P3-201ENST00000564581 315 ntBASIC1.33□□□□□ -2.2
RNF13O43567 MIR4703-201ENST00000577728 79 ntBASIC1.33□□□□□ -2.2
RNF13O43567 MIR98-201ENST00000606724 119 ntBASIC1.33□□□□□ -2.2
RNF13O43567 AL136370.1-201ENST00000608166 691 ntBASIC1.33□□□□□ -2.2
RNF13O43567 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RNF13O43567 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.33□□□□□ -2.2
RNF13O43567 RNU6-553P-201ENST00000364047 96 ntBASIC1.32□□□□□ -2.2
RNF13O43567 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
RNF13O43567 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
RNF13O43567 RPL31P35-201ENST00000431058 377 ntBASIC1.32□□□□□ -2.2
RNF13O43567 HSPE1P9-201ENST00000440046 311 ntBASIC1.32□□□□□ -2.2
RNF13O43567 MTND1P18-201ENST00000448191 573 ntBASIC1.32□□□□□ -2.2
RNF13O43567 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.32□□□□□ -2.2
RNF13O43567 AC079140.3-201ENST00000511111 550 ntBASIC1.32□□□□□ -2.2
RNF13O43567 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
RNF13O43567 RNU6-1098P-201ENST00000516772 96 ntBASIC1.32□□□□□ -2.2
RNF13O43567 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
RNF13O43567 AP001372.4-201ENST00000524889 472 ntBASIC1.32□□□□□ -2.2
RNF13O43567 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
RNF13O43567 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.32□□□□□ -2.2
RNF13O43567 ZNF321P-202ENST00000550843 495 ntBASIC1.32□□□□□ -2.2
RNF13O43567 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.32□□□□□ -2.2
RNF13O43567 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.32□□□□□ -2.2
RNF13O43567 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
RNF13O43567 CYP4A27P-201ENST00000567218 190 ntBASIC1.32□□□□□ -2.2
RNF13O43567 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.32□□□□□ -2.2
RNF13O43567 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.32□□□□□ -2.2
RNF13O43567 MIR3941-201ENST00000582572 103 ntBASIC1.32□□□□□ -2.2
RNF13O43567 AC091304.6-201ENST00000619761 202 ntBASIC1.32□□□□□ -2.2
RNF13O43567 AL450472.1-202ENST00000637286 180 ntBASIC1.32□□□□□ -2.2
RNF13O43567 ICE2P2-201ENST00000483823 2787 ntBASIC1.32□□□□□ -2.2
RNF13O43567 SNORD33-201ENST00000362761 85 ntBASIC1.31□□□□□ -2.2
RNF13O43567 RNU6-552P-201ENST00000362869 119 ntBASIC1.31□□□□□ -2.2
RNF13O43567 RNU1-76P-201ENST00000362903 159 ntBASIC1.31□□□□□ -2.2
RNF13O43567 RNU6-1127P-201ENST00000384580 107 ntBASIC1.31□□□□□ -2.2
RNF13O43567 SNORA40.3-201ENST00000390964 122 ntBASIC1.31□□□□□ -2.2
RNF13O43567 SNORD70.1-201ENST00000391007 85 ntBASIC1.31□□□□□ -2.2
RNF13O43567 VN1R108P-201ENST00000431580 830 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC099677.2-201ENST00000436385 175 ntBASIC1.31□□□□□ -2.2
RNF13O43567 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC007395.1-201ENST00000451333 677 ntBASIC1.31□□□□□ -2.2
RNF13O43567 ATP5J2P3-201ENST00000451550 258 ntBASIC1.31□□□□□ -2.2
RNF13O43567 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.31□□□□□ -2.2
RNF13O43567 RNA5SP269-201ENST00000459032 137 ntBASIC1.31□□□□□ -2.2
RNF13O43567 RNU7-14P-201ENST00000459331 62 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.31□□□□□ -2.2
RNF13O43567 RNU5F-4P-201ENST00000516581 114 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.31□□□□□ -2.2
RNF13O43567 AC008015.1-201ENST00000555505 465 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC021231.3-201ENST00000558497 370 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC245014.2-201ENST00000603689 287 ntBASIC1.31□□□□□ -2.2
RNF13O43567 Z98751.3-201ENST00000604447 521 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC246785.4-201ENST00000605374 287 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC005520.5-201ENST00000613926 164 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AC083806.3-201ENST00000614016 455 ntBASIC1.31□□□□□ -2.2
RNF13O43567 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AL121890.5-201ENST00000620848 304 ntBASIC1.31□□□□□ -2.2
RNF13O43567 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.31□□□□□ -2.2
RNF13O43567 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RNF13O43567 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
RNF13O43567 AC010615.1-201ENST00000594254 1764 ntBASIC1.31□□□□□ -2.2
RNF13O43567 AL159152.1-201ENST00000635019 2587 ntBASIC1.31□□□□□ -2.2
RNF13O43567 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
RNF13O43567 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RNF13O43567 RNU1-62P-201ENST00000362599 164 ntBASIC1.3□□□□□ -2.2
RNF13O43567 RNU6-60P-201ENST00000364792 103 ntBASIC1.3□□□□□ -2.2
RNF13O43567 SNORD1A-201ENST00000364968 72 ntBASIC1.3□□□□□ -2.2
RNF13O43567 SNORA16.2-201ENST00000390991 127 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.3□□□□□ -2.2
RNF13O43567 SDAD1P3-201ENST00000427380 333 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC245047.4-201ENST00000433189 144 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.3□□□□□ -2.2
RNF13O43567 AL031274.1-201ENST00000450334 232 ntBASIC1.3□□□□□ -2.2
RNF13O43567 RNU7-125P-201ENST00000458760 62 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC008628.2-201ENST00000502605 298 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.3□□□□□ -2.2
RNF13O43567 AK3P2-201ENST00000507976 429 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC108078.1-201ENST00000508073 725 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.3□□□□□ -2.2
RNF13O43567 MTCO3P28-201ENST00000513351 515 ntBASIC1.3□□□□□ -2.2
RNF13O43567 RNA5SP481-201ENST00000516814 122 ntBASIC1.3□□□□□ -2.2
RNF13O43567 RNA5SP437-201ENST00000517249 129 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AP005597.4-201ENST00000526762 229 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RNF13O43567 AC005668.1-201ENST00000571142 476 ntBASIC1.3□□□□□ -2.2
RNF13O43567 RSL24D1P11-201ENST00000591045 491 ntBASIC1.3□□□□□ -2.2
RNF13O43567 VN1R80P-201ENST00000597126 338 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC002044.1-201ENST00000606707 158 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC024933.1-201ENST00000608472 348 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AC122133.1-201ENST00000613964 233 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AL136221.1-201ENST00000621449 509 ntBASIC1.3□□□□□ -2.2
RNF13O43567 AF246928.1-201ENST00000623768 87 ntBASIC1.3□□□□□ -2.2
RNF13O43567 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RNF13O43567 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RNF13O43567 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RNF13O43567 RNU6-266P-201ENST00000364225 107 ntBASIC1.29□□□□□ -2.2
RNF13O43567 RNU6-1019P-201ENST00000364424 107 ntBASIC1.29□□□□□ -2.2
RNF13O43567 RNU6-827P-201ENST00000365553 106 ntBASIC1.29□□□□□ -2.2
RNF13O43567 RNU6-378P-201ENST00000384324 107 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms