Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.14□□□□□ -1.91
PRPF3O43395 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.14□□□□□ -1.91
PRPF3O43395 MTND4P28-201ENST00000426217 387 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.14□□□□□ -1.91
PRPF3O43395 RPL39P40-201ENST00000445481 146 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 SNRPGP7-201ENST00000469016 106 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 RPL7P42-201ENST00000481005 679 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 CKS1BP2-201ENST00000497342 240 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.14□□□□□ -1.91
PRPF3O43395 RNU6-1198P-201ENST00000516904 67 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 RNU6-56P-201ENST00000516986 93 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.14□□□□□ -1.91
PRPF3O43395 RPL17P51-201ENST00000605218 238 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 AL050343.2-201ENST00000607338 280 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 AC005520.5-201ENST00000613926 164 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 AC084781.2-201ENST00000615568 161 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 Z82209.1-201ENST00000422141 2135 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 AC006026.1-201ENST00000444025 1803 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PRPF3O43395 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PRPF3O43395 AC069528.2-201ENST00000624849 1991 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 Y_RNA.2-201ENST00000362330 96 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 Y_RNA.40-201ENST00000362645 93 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 U3.13-201ENST00000364804 214 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 Y_RNA.460-201ENST00000384255 102 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 SNORA41-201ENST00000384675 132 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 MIR95-201ENST00000385072 81 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 UBBP3-201ENST00000445497 241 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 RPL30P15-201ENST00000457129 321 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 Y_RNA.653-201ENST00000459091 95 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 AC090574.1-201ENST00000623186 233 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 AC006386.2-201ENST00000624491 75 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 AC012005.1-201ENST00000624575 75 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 SCARNA4-201ENST00000629045 128 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 MIR6733-201ENST00000635723 61 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.13□□□□□ -1.91
PRPF3O43395 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.13□□□□□ -1.91
PRPF3O43395 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.13□□□□□ -1.91
PRPF3O43395 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF3O43395 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF3O43395 SNORD115-32-201ENST00000364079 82 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 Y_RNA.315-201ENST00000365117 102 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 Y_RNA.404-201ENST00000383978 102 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 RNU6-310P-201ENST00000384655 107 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 Y_RNA.646-201ENST00000410980 101 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 RPS20P15-201ENST00000412792 311 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF3O43395 AC003685.2-201ENST00000422795 395 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 AC012306.1-201ENST00000423267 114 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.12□□□□□ -1.91
PRPF3O43395 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF3O43395 AL161788.1-201ENST00000441805 169 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF3O43395 HMGN1P13-201ENST00000505795 138 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF3O43395 RNU6-586P-201ENST00000517265 104 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF3O43395 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.12□□□□□ -1.91
PRPF3O43395 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF3O43395 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF3O43395 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.12□□□□□ -1.91
PRPF3O43395 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF3O43395 CYP2C61P-201ENST00000604072 290 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 U4atac.1-201ENST00000618345 95 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 SNORA43.4-201ENST00000629559 138 ntBASIC3.12□□□□□ -1.91
PRPF3O43395 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.12□□□□□ -1.91
PRPF3O43395 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF3O43395 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
PRPF3O43395 SNORD50.1-201ENST00000362987 71 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 RNU6-137P-201ENST00000363680 108 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 Y_RNA.419-201ENST00000384041 102 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 RNU6-220P-201ENST00000390919 107 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 CBX3P6-201ENST00000430257 527 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.11□□□□□ -1.91
PRPF3O43395 AC025750.2-201ENST00000442609 450 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 UBE2V1P7-201ENST00000446395 340 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AL353705.4-201ENST00000449661 238 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AC079354.2-201ENST00000453523 154 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.11□□□□□ -1.91
PRPF3O43395 AC132942.1-201ENST00000486753 483 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AC140059.1-201ENST00000489238 361 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.11□□□□□ -1.91
PRPF3O43395 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.11□□□□□ -1.91
PRPF3O43395 AC005741.1-201ENST00000511094 432 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AC093303.1-201ENST00000514549 295 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 SNORA25.11-201ENST00000515935 105 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 SNORA48.11-201ENST00000517015 89 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.11□□□□□ -1.91
PRPF3O43395 GTF3AP2-201ENST00000557014 266 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AC023824.2-201ENST00000566185 400 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 AL133255.1-201ENST00000606374 441 ntBASIC3.11□□□□□ -1.91
PRPF3O43395 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
PRPF3O43395 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF3O43395 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.1□□□□□ -1.91
PRPF3O43395 RNU5B-2P-201ENST00000363036 113 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 SNORA29-201ENST00000384183 140 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AL356057.3-201ENST00000402607 340 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 RNA5SP494-201ENST00000410653 129 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms