Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC079140.3-201ENST00000511111 550 ntBASIC1.73□□□□□ -2.13
MSH4O15457 MRPS17P9-201ENST00000511924 393 ntBASIC1.73□□□□□ -2.13
MSH4O15457 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.73□□□□□ -2.13
MSH4O15457 TRAV32-201ENST00000553993 340 ntBASIC1.73□□□□□ -2.13
MSH4O15457 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
MSH4O15457 SNORD53B-201ENST00000577887 78 ntBASIC1.73□□□□□ -2.13
MSH4O15457 MIR3941-201ENST00000582572 103 ntBASIC1.73□□□□□ -2.13
MSH4O15457 uc_338.34-201ENST00000617467 174 ntBASIC1.73□□□□□ -2.13
MSH4O15457 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.73□□□□□ -2.13
MSH4O15457 Y_RNA.1-201ENST00000352915 104 ntBASIC1.72□□□□□ -2.13
MSH4O15457 RNU4-15P-201ENST00000362613 141 ntBASIC1.72□□□□□ -2.13
MSH4O15457 RNU4-13P-201ENST00000364019 141 ntBASIC1.72□□□□□ -2.13
MSH4O15457 Y_RNA.338-201ENST00000365320 114 ntBASIC1.72□□□□□ -2.13
MSH4O15457 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MSH4O15457 SNORD116-9-201ENST00000384000 95 ntBASIC1.72□□□□□ -2.13
MSH4O15457 SNORD116-3-201ENST00000384287 95 ntBASIC1.72□□□□□ -2.13
MSH4O15457 SNORD116-7-201ENST00000384404 95 ntBASIC1.72□□□□□ -2.13
MSH4O15457 SNORD116-5-201ENST00000384462 95 ntBASIC1.72□□□□□ -2.13
MSH4O15457 RNU6-1158P-201ENST00000391167 107 ntBASIC1.72□□□□□ -2.13
MSH4O15457 MIR1283-2-201ENST00000408621 87 ntBASIC1.72□□□□□ -2.13
MSH4O15457 RNU4-62P-201ENST00000410125 130 ntBASIC1.72□□□□□ -2.13
MSH4O15457 Y_RNA.595-201ENST00000410403 105 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.72□□□□□ -2.13
MSH4O15457 AL158823.1-201ENST00000418441 478 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AL353193.1-201ENST00000421444 268 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AL590135.1-201ENST00000422215 156 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AC019205.3-201ENST00000424573 156 ntBASIC1.72□□□□□ -2.13
MSH4O15457 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.72□□□□□ -2.13
MSH4O15457 AC244670.1-201ENST00000436879 112 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AC016700.2-201ENST00000446011 156 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.72□□□□□ -2.13
MSH4O15457 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.72□□□□□ -2.13
MSH4O15457 AL163973.1-201ENST00000484753 577 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH4O15457 AC015911.1-201ENST00000495111 156 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AC145146.1-201ENST00000496370 254 ntBASIC1.72□□□□□ -2.13
MSH4O15457 HMGB1P29-201ENST00000505659 499 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH4O15457 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH4O15457 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH4O15457 MIR4299-201ENST00000577899 72 ntBASIC1.72□□□□□ -2.13
MSH4O15457 MIR3136-201ENST00000583498 78 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH4O15457 VN1R80P-201ENST00000597126 338 ntBASIC1.72□□□□□ -2.13
MSH4O15457 AC243960.4-201ENST00000600532 288 ntBASIC1.72□□□□□ -2.13
MSH4O15457 VN1R107P-201ENST00000601784 209 ntBASIC1.72□□□□□ -2.13
MSH4O15457 RNU6-85P-201ENST00000605989 107 ntBASIC1.72□□□□□ -2.13
MSH4O15457 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.72□□□□□ -2.13
MSH4O15457 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
MSH4O15457 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
MSH4O15457 SNORA12-201ENST00000391162 147 ntBASIC1.71□□□□□ -2.14
MSH4O15457 RNA5SP465-201ENST00000391195 109 ntBASIC1.71□□□□□ -2.14
MSH4O15457 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
MSH4O15457 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.71□□□□□ -2.14
MSH4O15457 MTND2P29-201ENST00000438595 412 ntBASIC1.71□□□□□ -2.14
MSH4O15457 MTATP6P26-201ENST00000445926 662 ntBASIC1.71□□□□□ -2.14
MSH4O15457 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
MSH4O15457 AC108078.1-201ENST00000508073 725 ntBASIC1.71□□□□□ -2.14
MSH4O15457 AC093259.1-201ENST00000509755 300 ntBASIC1.71□□□□□ -2.14
MSH4O15457 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.71□□□□□ -2.14
MSH4O15457 AP005660.1-201ENST00000522972 293 ntBASIC1.71□□□□□ -2.14
MSH4O15457 MTND4P7-201ENST00000523876 130 ntBASIC1.71□□□□□ -2.14
MSH4O15457 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.71□□□□□ -2.14
MSH4O15457 HSPE1P4-201ENST00000550617 308 ntBASIC1.71□□□□□ -2.14
MSH4O15457 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.71□□□□□ -2.14
MSH4O15457 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.71□□□□□ -2.14
MSH4O15457 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.71□□□□□ -2.14
MSH4O15457 AC012507.3-201ENST00000603556 477 ntBASIC1.71□□□□□ -2.14
MSH4O15457 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.71□□□□□ -2.14
MSH4O15457 AC009509.4-201ENST00000619202 509 ntBASIC1.71□□□□□ -2.14
MSH4O15457 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
MSH4O15457 AP000560.1-201ENST00000624150 1937 ntBASIC1.71□□□□□ -2.14
MSH4O15457 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.71□□□□□ -2.14
MSH4O15457 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
MSH4O15457 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
MSH4O15457 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
MSH4O15457 Y_RNA.51-201ENST00000362725 102 ntBASIC1.7□□□□□ -2.14
MSH4O15457 RNU6-1164P-201ENST00000364428 107 ntBASIC1.7□□□□□ -2.14
MSH4O15457 SNORD32A-201ENST00000364805 84 ntBASIC1.7□□□□□ -2.14
MSH4O15457 RNU6-142P-201ENST00000384019 107 ntBASIC1.7□□□□□ -2.14
MSH4O15457 MIR597-201ENST00000384968 97 ntBASIC1.7□□□□□ -2.14
MSH4O15457 Y_RNA.582-201ENST00000391023 95 ntBASIC1.7□□□□□ -2.14
MSH4O15457 RNU11-3P-201ENST00000391111 133 ntBASIC1.7□□□□□ -2.14
MSH4O15457 DEFB108C-201ENST00000400154 252 ntBASIC1.7□□□□□ -2.14
MSH4O15457 AL606923.1-201ENST00000406616 190 ntBASIC1.7□□□□□ -2.14
MSH4O15457 RNU4-55P-201ENST00000410731 137 ntBASIC1.7□□□□□ -2.14
MSH4O15457 POLHP1-201ENST00000411806 470 ntBASIC1.7□□□□□ -2.14
MSH4O15457 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.7□□□□□ -2.14
MSH4O15457 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.7□□□□□ -2.14
MSH4O15457 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.7□□□□□ -2.14
MSH4O15457 VN1R108P-201ENST00000431580 830 ntBASIC1.7□□□□□ -2.14
MSH4O15457 SNAP23P1-201ENST00000433229 246 ntBASIC1.7□□□□□ -2.14
MSH4O15457 AL606489.2-201ENST00000433886 234 ntBASIC1.7□□□□□ -2.14
MSH4O15457 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.7□□□□□ -2.14
MSH4O15457 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.7□□□□□ -2.14
MSH4O15457 HMGB3P17-201ENST00000504195 649 ntBASIC1.7□□□□□ -2.14
MSH4O15457 MIR449C-201ENST00000516047 92 ntBASIC1.7□□□□□ -2.14
MSH4O15457 SNORA31.16-201ENST00000516773 139 ntBASIC1.7□□□□□ -2.14
MSH4O15457 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.7□□□□□ -2.14
MSH4O15457 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms