Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC008993.2-201ENST00000631744 806 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AC068205.3-201ENST00000636385 468 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 SNORA36.2-201ENST00000384004 127 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 SNORD12-201ENST00000391002 90 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 AF228730.1-201ENST00000397972 663 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.03□□□□□ -2.4
CACNA1AO00555 RNU4-27P-201ENST00000410889 139 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.03□□□□□ -2.4
CACNA1AO00555 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CACNA1AO00555 RAC1P8-201ENST00000427086 527 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 HMGN2P34-201ENST00000437647 269 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 MTND1P30-201ENST00000441241 901 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.03□□□□□ -2.4
CACNA1AO00555 AC010631.1-201ENST00000474150 156 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 HMGB1P30-201ENST00000492455 606 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.03□□□□□ -2.4
CACNA1AO00555 RNU5B-3P-201ENST00000516601 115 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.03□□□□□ -2.4
CACNA1AO00555 MIR4782-201ENST00000577987 79 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 AL353997.4-201ENST00000586196 166 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 AL355598.1-201ENST00000604169 202 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 MIR3976-201ENST00000606807 139 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 AL133445.2-201ENST00000611191 527 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 AC104820.1-201ENST00000624183 307 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 U6.101-201ENST00000637707 76 ntBASIC0.03□□□□□ -2.4
CACNA1AO00555 RNU6-858P-201ENST00000362436 107 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 RNU6-1167P-201ENST00000363227 94 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 RNU6-1245P-201ENST00000411130 106 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 MTCYBP38-201ENST00000417160 1123 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 ELOCP9-201ENST00000418624 239 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 MTCO1P57-201ENST00000432182 261 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.03□□□□□ -2.41
CACNA1AO00555 MTND4P19-201ENST00000446659 478 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 OR2AQ1P-201ENST00000451972 200 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.03□□□□□ -2.41
CACNA1AO00555 MED28P2-201ENST00000475771 317 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 RPS26P48-201ENST00000491713 339 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 RNU5A-4P-201ENST00000516588 111 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 SNORA31.17-201ENST00000516953 127 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
CACNA1AO00555 AC022432.1-201ENST00000595739 310 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 AL158211.4-201ENST00000606988 584 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
CACNA1AO00555 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 AC120349.3-201ENST00000624377 529 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.03□□□□□ -2.41
CACNA1AO00555 PCMTD1P7-201ENST00000634506 357 ntBASIC0.03□□□□□ -2.41
CACNA1AO00555 SGO1P1-201ENST00000603525 1447 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 RNU6-1082P-201ENST00000364574 107 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 SNORD114-24-201ENST00000365029 72 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 RNU6-1280P-201ENST00000365211 107 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 RNA5SP259-201ENST00000365541 109 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 SUGT1P1-201ENST00000379514 476 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 RNU6-1237P-201ENST00000384777 107 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MIR186-201ENST00000384988 86 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CACNA1AO00555 TPMTP2-201ENST00000414372 726 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AL161935.2-201ENST00000414627 60 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MTATP6P27-201ENST00000416987 621 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MTCO2P12-201ENST00000427426 682 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.02□□□□□ -2.41
CACNA1AO00555 AC245047.7-201ENST00000440265 293 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MTND2P4-201ENST00000445034 1004 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MTCYBP11-201ENST00000447254 1109 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.02□□□□□ -2.41
CACNA1AO00555 MTND5P13-201ENST00000513046 1079 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MTCYBP43-201ENST00000513621 740 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC022616.8-201ENST00000533569 253 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC025678.1-201ENST00000567861 338 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.02□□□□□ -2.41
CACNA1AO00555 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 BNIP3P24-201ENST00000593398 557 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.02□□□□□ -2.41
CACNA1AO00555 KATNBL1P5-201ENST00000605015 517 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC091946.2-201ENST00000606105 291 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC093648.1-201ENST00000623546 606 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MIR1248-201ENST00000629190 106 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MIR4275-201ENST00000636486 87 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 RNU6-188P-201ENST00000364207 107 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 RNU6-793P-201ENST00000384233 104 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 RNU6-296P-201ENST00000384608 107 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MIR194-1-201ENST00000384892 85 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.02□□□□□ -2.41
CACNA1AO00555 ARL5AP1-201ENST00000418991 388 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AL451054.2-201ENST00000420896 202 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 C8orf59P1-201ENST00000429930 303 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.02□□□□□ -2.41
CACNA1AO00555 AC079140.3-201ENST00000511111 550 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.02□□□□□ -2.41
CACNA1AO00555 RNU6-528P-201ENST00000516926 100 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.02□□□□□ -2.41
CACNA1AO00555 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.02□□□□□ -2.41
CACNA1AO00555 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
CACNA1AO00555 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.02□□□□□ -2.41
CACNA1AO00555 AL442163.3-201ENST00000554110 156 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AP003465.2-201ENST00000602571 373 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AL390208.1-201ENST00000605885 644 ntBASIC0.02□□□□□ -2.41
CACNA1AO00555 AC034229.4-201ENST00000607861 441 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms