Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC104073.3-201ENST00000610942 955 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 RMST_2.1-201ENST00000617263 136 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AL159152.1-201ENST00000635019 2587 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 AC245060.5-201ENST00000610778 3293 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-1123P-201ENST00000362347 106 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-105P-201ENST00000363909 104 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-1141P-201ENST00000364520 107 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-534P-201ENST00000364877 106 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 AL591043.1-201ENST00000432461 424 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 AC243964.1-201ENST00000441814 261 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 AC007395.1-201ENST00000451333 677 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 AC010531.2-201ENST00000465012 153 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-856P-201ENST00000516959 98 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 AC016957.1-201ENST00000534895 309 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 ADI1P3-201ENST00000549509 470 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 MIR4742-201ENST00000581069 85 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 MTCO2P2-201ENST00000591258 225 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 DEFB131E-202ENST00000602581 683 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 RPL17P51-201ENST00000605218 238 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 CTHRC1P1-201ENST00000605383 469 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 AL021879.1-201ENST00000611756 288 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 MIR6835-201ENST00000621552 64 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 Z69720.2-201ENST00000624755 279 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 SNORD98-201ENST00000636377 67 ntBASIC0.54□□□□□ -2.32
TRAV3A0A0B4J244 RNY4P16-201ENST00000364768 94 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 RNU5E-7P-201ENST00000365290 117 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 MIR613-201ENST00000385248 95 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AL356776.1-201ENST00000406574 447 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 RNU2-3P-201ENST00000410144 191 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 RNU2-72P-201ENST00000411175 163 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 RPS3AP37-201ENST00000419176 745 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 PIGFP2-201ENST00000421400 651 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 RPL39P38-201ENST00000467018 153 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 TRBVA-201ENST00000498804 316 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 PSMC1P5-201ENST00000512850 177 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AC092451.2-201ENST00000538746 658 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AC133485.1-201ENST00000567176 124 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AC138907.6-201ENST00000568401 126 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 MTATP6P3-201ENST00000581686 676 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AC012507.3-201ENST00000603556 477 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 AL590095.2-201ENST00000604136 117 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 MIR6515-201ENST00000619843 57 ntBASIC0.53□□□□□ -2.32
TRAV3A0A0B4J244 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 RNU1-76P-201ENST00000362903 159 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 RNU4-1-201ENST00000363925 141 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 RNU1-96P-201ENST00000364163 162 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-438P-201ENST00000365561 103 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 SNORD12-201ENST00000391002 90 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-607P-201ENST00000411283 108 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC114482.1-201ENST00000418010 247 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 RAB28P5-201ENST00000427490 651 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC078809.1-201ENST00000427601 140 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 EEF1A1P39-201ENST00000440791 250 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-123P-201ENST00000516163 102 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC090888.2-201ENST00000559765 1144 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC008088.1-201ENST00000580993 280 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AL356157.2-201ENST00000605122 111 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC013244.3-201ENST00000605614 388 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC040896.1-201ENST00000613819 479 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AC006927.4-201ENST00000639187 543 ntBASIC0.52□□□□□ -2.33
TRAV3A0A0B4J244 AL442644.1-201ENST00000454390 3105 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 RNY1-201ENST00000364228 113 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 SNORD115.1-201ENST00000391109 76 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-1054P-201ENST00000411293 104 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 RNU2-64P-201ENST00000411315 191 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 AC010099.3-201ENST00000423896 409 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms