Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ARFGEF1Q9Y6D6 AC104417.2-201ENST00000562989 1793 ntBASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 FAM197Y8-203ENST00000450145 560 ntBASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 AC091607.1-201ENST00000490318 1060 ntBASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.16■■□□□ 1.3
ARFGEF1Q9Y6D6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AC022898.2-201ENST00000616822 1312 ntBASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 VENTXP7-201ENST00000475503 772 ntBASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AC112497.1-201ENST00000624824 639 ntBASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.15■■□□□ 1.3
ARFGEF1Q9Y6D6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.14■■□□□ 1.3
ARFGEF1Q9Y6D6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARFGEF1Q9Y6D6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARFGEF1Q9Y6D6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARFGEF1Q9Y6D6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.14■■□□□ 1.3
ARFGEF1Q9Y6D6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.14■■□□□ 1.3
ARFGEF1Q9Y6D6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
ARFGEF1Q9Y6D6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARFGEF1Q9Y6D6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 PMS2P7-201ENST00000506558 1336 ntBASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 AC008608.2-201ENST00000606089 416 ntBASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 AP005212.1-201ENST00000581547 1997 ntBASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ARFGEF1Q9Y6D6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.13■■□□□ 1.29
ARFGEF1Q9Y6D6 AC010327.4-202ENST00000591484 748 ntBASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms