Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL17A1Q9UMD9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC28.73■■■□□ 2.19
COL17A1Q9UMD9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 KRT18P23-201ENST00000435622 1283 ntBASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 AC112482.1-201ENST00000492080 688 ntBASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC28.72■■■□□ 2.19
COL17A1Q9UMD9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 AP003733.1-201ENST00000491725 852 ntBASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 AC008608.2-201ENST00000606089 416 ntBASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 AC134684.3-201ENST00000641758 218 ntBASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL17A1Q9UMD9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL17A1Q9UMD9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
COL17A1Q9UMD9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL17A1Q9UMD9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL17A1Q9UMD9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL17A1Q9UMD9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 LBH-204ENST00000406087 559 ntTSL 4 BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 AC034105.1-201ENST00000563488 319 ntBASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 GPR32P1-201ENST00000601788 811 ntBASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 FAM197Y3-203ENST00000618346 717 ntBASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL17A1Q9UMD9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 AP001271.2-201ENST00000624018 1556 ntBASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
COL17A1Q9UMD9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 CALY-203ENST00000368558 825 ntTSL 5 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 DDT-203ENST00000403754 569 ntTSL 3 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 CD63-204ENST00000546939 779 ntTSL 3 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 AC027601.4-201ENST00000611259 610 ntBASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms