Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 SMG8-203ENST00000578922 2178 ntBASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ZNF248Q8NDW4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 CR769767.2-201ENST00000622735 460 ntBASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 RNF165-205ENST00000588679 2904 ntBASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ZNF248Q8NDW4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 KRT8P10-201ENST00000450021 1447 ntBASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 AL845331.1-201ENST00000424978 1190 ntBASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 KRT17P6-201ENST00000453795 1220 ntBASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF248Q8NDW4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 AL645929.1-201ENST00000420084 975 ntBASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 GPALPP1-207ENST00000611650 899 ntBASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF248Q8NDW4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms