Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.65■■□□□ 1.54
PRIM1P49642 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PRIM1P49642 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.65■■□□□ 1.54
PRIM1P49642 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.65■■□□□ 1.54
PRIM1P49642 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC24.65■■□□□ 1.54
PRIM1P49642 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC24.65■■□□□ 1.54
PRIM1P49642 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRIM1P49642 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.65■■□□□ 1.54
PRIM1P49642 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRIM1P49642 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRIM1P49642 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRIM1P49642 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PRIM1P49642 AC073314.1-201ENST00000568729 2216 ntBASIC24.65■■□□□ 1.54
PRIM1P49642 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PRIM1P49642 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC24.65■■□□□ 1.54
PRIM1P49642 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRIM1P49642 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRIM1P49642 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRIM1P49642 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.64■■□□□ 1.54
PRIM1P49642 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
PRIM1P49642 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRIM1P49642 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PRIM1P49642 MIR662-201ENST00000384847 95 ntBASIC24.64■■□□□ 1.54
PRIM1P49642 TSPY22P-201ENST00000427496 604 ntBASIC24.64■■□□□ 1.54
PRIM1P49642 AC079781.3-201ENST00000449110 356 ntBASIC24.64■■□□□ 1.54
PRIM1P49642 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
PRIM1P49642 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.64■■□□□ 1.54
PRIM1P49642 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.64■■□□□ 1.54
PRIM1P49642 GPALPP1-207ENST00000611650 899 ntBASIC24.64■■□□□ 1.54
PRIM1P49642 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PRIM1P49642 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.64■■□□□ 1.53
PRIM1P49642 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PRIM1P49642 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PRIM1P49642 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PRIM1P49642 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.63■■□□□ 1.53
PRIM1P49642 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PRIM1P49642 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PRIM1P49642 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PRIM1P49642 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PRIM1P49642 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PRIM1P49642 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.63■■□□□ 1.53
PRIM1P49642 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.63■■□□□ 1.53
PRIM1P49642 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PRIM1P49642 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PRIM1P49642 PNN-202ENST00000553331 656 ntTSL 3 BASIC24.63■■□□□ 1.53
PRIM1P49642 AL160237.2-201ENST00000556165 472 ntBASIC24.63■■□□□ 1.53
PRIM1P49642 TPSP2-201ENST00000561760 610 ntBASIC24.63■■□□□ 1.53
PRIM1P49642 RNF126P1-202ENST00000569893 925 ntBASIC24.63■■□□□ 1.53
PRIM1P49642 AC004263.2-201ENST00000617183 678 ntBASIC24.63■■□□□ 1.53
PRIM1P49642 AC023511.2-201ENST00000618803 211 ntBASIC24.63■■□□□ 1.53
PRIM1P49642 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PRIM1P49642 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PRIM1P49642 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
PRIM1P49642 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.62■■□□□ 1.53
PRIM1P49642 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRIM1P49642 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.62■■□□□ 1.53
PRIM1P49642 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PRIM1P49642 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRIM1P49642 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRIM1P49642 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRIM1P49642 AL022342.1-201ENST00000400363 863 ntBASIC24.62■■□□□ 1.53
PRIM1P49642 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.62■■□□□ 1.53
PRIM1P49642 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC24.62■■□□□ 1.53
PRIM1P49642 AP000867.3-201ENST00000524675 377 ntBASIC24.62■■□□□ 1.53
PRIM1P49642 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC24.62■■□□□ 1.53
PRIM1P49642 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC24.62■■□□□ 1.53
PRIM1P49642 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PRIM1P49642 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PRIM1P49642 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRIM1P49642 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.62■■□□□ 1.53
PRIM1P49642 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC24.62■■□□□ 1.53
PRIM1P49642 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRIM1P49642 LINC01006-201ENST00000333319 2292 ntBASIC24.61■■□□□ 1.53
PRIM1P49642 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PRIM1P49642 AL391807.1-203ENST00000604392 2365 ntBASIC24.61■■□□□ 1.53
PRIM1P49642 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PRIM1P49642 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PRIM1P49642 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PRIM1P49642 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PRIM1P49642 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.61■■□□□ 1.53
PRIM1P49642 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC24.61■■□□□ 1.53
PRIM1P49642 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PRIM1P49642 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PRIM1P49642 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PRIM1P49642 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.61■■□□□ 1.53
PRIM1P49642 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.61■■□□□ 1.53
PRIM1P49642 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.61■■□□□ 1.53
PRIM1P49642 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.61■■□□□ 1.53
PRIM1P49642 AC091304.2-201ENST00000564639 760 ntBASIC24.61■■□□□ 1.53
PRIM1P49642 AC006538.3-201ENST00000612495 578 ntBASIC24.61■■□□□ 1.53
PRIM1P49642 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC24.61■■□□□ 1.53
PRIM1P49642 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PRIM1P49642 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.61■■□□□ 1.53
PRIM1P49642 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.61■■□□□ 1.53
PRIM1P49642 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.61■■□□□ 1.53
PRIM1P49642 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.61■■□□□ 1.53
PRIM1P49642 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PRIM1P49642 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PRIM1P49642 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PRIM1P49642 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms