Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRBV12-3P01733 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.67□□□□□ -0.06
TRBV12-3P01733 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV12-3P01733 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV12-3P01733 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRBV12-3P01733 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.67□□□□□ -0.06
TRBV12-3P01733 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV12-3P01733 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV12-3P01733 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 CYP2D8P-201ENST00000433633 1490 ntBASIC14.66□□□□□ -0.06
TRBV12-3P01733 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 AP005242.2-201ENST00000580065 1175 ntBASIC14.66□□□□□ -0.06
TRBV12-3P01733 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 AC098818.2-201ENST00000564925 2320 ntBASIC14.66□□□□□ -0.06
TRBV12-3P01733 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV12-3P01733 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV12-3P01733 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TRBV12-3P01733 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRBV12-3P01733 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV12-3P01733 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.65□□□□□ -0.06
TRBV12-3P01733 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV12-3P01733 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV12-3P01733 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.65□□□□□ -0.06
TRBV12-3P01733 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV12-3P01733 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV12-3P01733 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 MMP23A-201ENST00000234610 1017 ntBASIC14.64□□□□□ -0.07
TRBV12-3P01733 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV12-3P01733 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV12-3P01733 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV12-3P01733 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV12-3P01733 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV12-3P01733 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV12-3P01733 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV12-3P01733 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV12-3P01733 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV12-3P01733 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms