Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRKNO60260 KRT18P22-201ENST00000402024 1347 ntBASIC17.66■□□□□ 0.42
PRKNO60260 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.66■□□□□ 0.42
PRKNO60260 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRKNO60260 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKNO60260 AL161938.1-201ENST00000569833 2180 ntBASIC17.66■□□□□ 0.42
PRKNO60260 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRKNO60260 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRKNO60260 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
PRKNO60260 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
PRKNO60260 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PRKNO60260 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PRKNO60260 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.65■□□□□ 0.42
PRKNO60260 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PRKNO60260 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PRKNO60260 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.65■□□□□ 0.42
PRKNO60260 KRT18P21-201ENST00000515767 1272 ntBASIC17.65■□□□□ 0.42
PRKNO60260 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 AL023803.3-201ENST00000615559 522 ntBASIC17.65■□□□□ 0.42
PRKNO60260 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PRKNO60260 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKNO60260 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PRKNO60260 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PRKNO60260 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PRKNO60260 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRKNO60260 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.64■□□□□ 0.41
PRKNO60260 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.64■□□□□ 0.41
PRKNO60260 FAM87A-204ENST00000613235 858 ntBASIC17.64■□□□□ 0.41
PRKNO60260 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.64■□□□□ 0.41
PRKNO60260 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKNO60260 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKNO60260 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PRKNO60260 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.63■□□□□ 0.41
PRKNO60260 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKNO60260 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.63■□□□□ 0.41
PRKNO60260 AC007663.1-201ENST00000438948 1240 ntBASIC17.63■□□□□ 0.41
PRKNO60260 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKNO60260 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.63■□□□□ 0.41
PRKNO60260 SLC25A3P1-201ENST00000443844 931 ntBASIC17.63■□□□□ 0.41
PRKNO60260 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.63■□□□□ 0.41
PRKNO60260 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKNO60260 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.63■□□□□ 0.41
PRKNO60260 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.63■□□□□ 0.41
PRKNO60260 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 AC005363.2-201ENST00000618631 242 ntBASIC17.63■□□□□ 0.41
PRKNO60260 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
PRKNO60260 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.63■□□□□ 0.41
PRKNO60260 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PRKNO60260 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PRKNO60260 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PRKNO60260 AC092338.2-201ENST00000568827 1415 ntBASIC17.63■□□□□ 0.41
PRKNO60260 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.63■□□□□ 0.41
PRKNO60260 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKNO60260 FP475955.4-201ENST00000623131 1990 ntBASIC17.62■□□□□ 0.41
PRKNO60260 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PRKNO60260 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PRKNO60260 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
PRKNO60260 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKNO60260 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.62■□□□□ 0.41
PRKNO60260 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.62■□□□□ 0.41
PRKNO60260 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.62■□□□□ 0.41
PRKNO60260 AC005521.1-201ENST00000393351 872 ntBASIC17.62■□□□□ 0.41
PRKNO60260 SLC25A1P2-201ENST00000430693 912 ntBASIC17.62■□□□□ 0.41
PRKNO60260 AC010203.1-204ENST00000548782 407 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms