Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Alx4O35137 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.4□□□□□ -0.1
Alx4O35137 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 App-207ENSMUST00000227737 2827 ntBASIC14.4□□□□□ -0.1
Alx4O35137 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Alx4O35137 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Alx4O35137 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Alx4O35137 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Alx4O35137 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Alx4O35137 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.4□□□□□ -0.1
Alx4O35137 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Alx4O35137 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Alx4O35137 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Alx4O35137 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.39□□□□□ -0.11
Alx4O35137 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx4O35137 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Alx4O35137 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Alx4O35137 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.38□□□□□ -0.11
Alx4O35137 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Alx4O35137 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.38□□□□□ -0.11
Alx4O35137 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Alx4O35137 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.38□□□□□ -0.11
Alx4O35137 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.38□□□□□ -0.11
Alx4O35137 Gm20760-201ENSMUST00000179197 648 ntBASIC14.38□□□□□ -0.11
Alx4O35137 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.38□□□□□ -0.11
Alx4O35137 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Alx4O35137 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Alx4O35137 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Alx4O35137 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Alx4O35137 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx4O35137 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.37□□□□□ -0.11
Alx4O35137 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx4O35137 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms