Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV17A0A0B4J275 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV17A0A0B4J275 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV17A0A0B4J275 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV17A0A0B4J275 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV17A0A0B4J275 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 AC112907.3-201ENST00000577781 2400 ntBASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 AL450487.1-201ENST00000426799 995 ntBASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 SPDYE13P-201ENST00000445314 798 ntBASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 AC092597.1-201ENST00000487352 616 ntBASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV17A0A0B4J275 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TRAV17A0A0B4J275 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
TRAV17A0A0B4J275 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV17A0A0B4J275 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 AL157384.1-201ENST00000445995 2473 ntBASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV17A0A0B4J275 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
TRAV17A0A0B4J275 SEC1P-202ENST00000473944 940 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms