Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC092140.2-201ENST00000618027 521 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 SNORD33-201ENST00000362761 85 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 RNU6-501P-201ENST00000364072 100 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 MIR548B-201ENST00000385247 97 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 RPL23AP32-201ENST00000395315 459 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 MRPL35P1-201ENST00000404272 572 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 RNU6-293P-201ENST00000411259 106 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 RNU6-387P-201ENST00000411331 105 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AL590135.1-201ENST00000422215 156 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC019205.3-201ENST00000424573 156 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC016700.2-201ENST00000446011 156 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 snoU13.30-201ENST00000458951 104 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC015911.1-201ENST00000495111 156 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC074344.1-201ENST00000512823 224 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 MTCO3P28-201ENST00000513351 515 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 RNU6-377P-201ENST00000515965 102 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 RNA5SP437-201ENST00000517249 129 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 PCMTD1P2-201ENST00000565017 355 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC008752.3-201ENST00000588113 712 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AL590229.1-201ENST00000603497 542 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC069114.2-201ENST00000604699 304 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC083806.3-201ENST00000614016 455 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.04□□□□□ -2.24
USH1CQ9Y6N9 AC010615.1-201ENST00000594254 1764 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-37P-201ENST00000362692 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-11P-201ENST00000364234 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU4-56P-201ENST00000364700 142 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-25P-201ENST00000383873 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-1-201ENST00000383898 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-116P-201ENST00000384042 109 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-48P-201ENST00000384161 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-36P-201ENST00000384172 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-4P-201ENST00000384205 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-5P-201ENST00000384238 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-43P-201ENST00000384302 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-3P-201ENST00000384314 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-16P-201ENST00000384385 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-15P-201ENST00000384534 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-2-201ENST00000384627 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-29P-201ENST00000384637 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-9-201ENST00000384776 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-33P-201ENST00000384793 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RPL37P10-201ENST00000412884 288 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 AL008987.1-201ENST00000415528 237 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 MTCO2P23-201ENST00000425216 680 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 AL365184.2-201ENST00000431139 435 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 AC244670.1-201ENST00000436879 112 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 SNORA31.16-201ENST00000516773 139 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 AC090115.3-201ENST00000553218 849 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 AC012507.3-201ENST00000603556 477 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-6P-201ENST00000606623 107 ntBASIC1.03□□□□□ -2.24
USH1CQ9Y6N9 RNU6-862P-201ENST00000362804 105 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 RNY1P12-201ENST00000364251 105 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 Y_RNA.255-201ENST00000364581 97 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 SNORA32.2-201ENST00000384049 122 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 RNU6-45P-201ENST00000384471 107 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 RNU6-692P-201ENST00000384496 107 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 Y_RNA.576-201ENST00000384781 102 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 SNORA12.2-201ENST00000391040 156 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 MTCYBP2-201ENST00000407745 171 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 MIR1276-201ENST00000408707 83 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AC010975.2-201ENST00000427781 588 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AC245047.4-201ENST00000433189 144 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AC099677.2-201ENST00000436385 175 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 OR2AQ1P-201ENST00000451972 200 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 SNORD60.2-201ENST00000516883 86 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 HMGN1P30-201ENST00000589286 268 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 AL121992.2-201ENST00000606262 256 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 MIR6504-201ENST00000613520 61 ntBASIC1.02□□□□□ -2.25
USH1CQ9Y6N9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms