Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 Y_RNA.462-201ENST00000384268 102 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-1203P-201ENST00000410703 110 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 RNU2-25P-201ENST00000411041 191 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-1001P-201ENST00000411265 100 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 AC139712.2-201ENST00000424302 339 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 RPL23AP70-201ENST00000483361 460 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 MIR2276-201ENST00000516886 89 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-570P-201ENST00000517051 105 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 AC010999.1-201ENST00000611856 324 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 AC011476.5-201ENST00000615594 130 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 ZNF204P-201ENST00000416749 2397 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 RNU1-75P-201ENST00000347264 129 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 Y_RNA.84-201ENST00000363011 104 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-1318P-201ENST00000365389 103 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-926P-201ENST00000384075 107 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 Y_RNA.447-201ENST00000384184 113 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 Y_RNA.562-201ENST00000384695 113 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 CYCSP19-201ENST00000411715 316 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AL035423.1-201ENST00000420331 213 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AL445584.1-201ENST00000431451 330 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AL357552.1-201ENST00000445254 415 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AC098869.1-201ENST00000481627 292 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 SNORA31.6-201ENST00000516241 130 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 SNORA25.14-201ENST00000516481 132 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 SNRPGP20-201ENST00000604477 205 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AL162713.1-201ENST00000604480 262 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 UCA1.1-201ENST00000620952 75 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AP003355.3-201ENST00000623465 114 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 AC026241.1-201ENST00000517873 2142 ntBASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PCDHA9Q9Y5H5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 MFSD8-236ENST00000641509 4050 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 Y_RNA.14-201ENST00000362415 103 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 SNORD9-201ENST00000362566 104 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 RNU4-15P-201ENST00000362613 141 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 SNORD81.1-201ENST00000363064 77 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-379P-201ENST00000363813 104 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-378P-201ENST00000384324 107 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 RNU1-101P-201ENST00000391171 127 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 AL512633.1-201ENST00000399931 655 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 Z98742.2-201ENST00000431564 187 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 AC007395.1-201ENST00000451333 677 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 RN7SL594P-201ENST00000470590 287 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 RPS23P5-201ENST00000495419 428 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 MIR3668-201ENST00000582138 75 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 MIR4765-201ENST00000585007 77 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 AL121772.2-201ENST00000614331 297 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
PCDHA9Q9Y5H5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 AL513302.2-201ENST00000562313 1842 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 MIR335-201ENST00000362173 94 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 RNU1-62P-201ENST00000362599 164 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 snoU2_19.2-201ENST00000363024 80 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 Y_RNA.595-201ENST00000410403 105 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 RN7SKP202-201ENST00000410439 330 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 RPL26P26-201ENST00000480251 434 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 Y_RNA.683-201ENST00000516508 93 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA9Q9Y5H5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms