Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AC010680.1-201ENST00000590024 3590 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 RNA5SP175-201ENST00000364275 119 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 SNORD37.2-201ENST00000391075 66 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 SNORA11F-201ENST00000408237 128 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 AL356387.2-201ENST00000422272 243 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 AC011998.1-201ENST00000433403 117 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 RNU7-141P-201ENST00000459304 62 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 RPL23AP62-201ENST00000463396 453 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 RPL35AP15-201ENST00000468042 339 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR4724-201ENST00000579485 89 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 AL670379.2-201ENST00000604983 252 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 uc_338.13-201ENST00000618243 179 ntBASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA11Q9Y5H2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 snoU2_19.1-201ENST00000362361 80 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 RNU6-1305P-201ENST00000364353 104 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AP002088.1-201ENST00000382740 395 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR1183-201ENST00000408856 89 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AC006461.1-201ENST00000412637 326 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 RPEP3-201ENST00000425462 676 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 MTND4LP9-201ENST00000427694 174 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 RPL23AP1-201ENST00000428990 471 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AL592156.1-201ENST00000508758 304 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AC025754.2-201ENST00000606491 432 ntBASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PCDHGA11Q9Y5H2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 Y_RNA.273-201ENST00000364703 102 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 Y_RNA.361-201ENST00000365515 120 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR586-201ENST00000385035 97 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR548B-201ENST00000385247 97 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 RNU6-1228P-201ENST00000391014 107 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 AC245047.8-201ENST00000456455 284 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 RPS26P15-201ENST00000488067 348 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 PARP4P3-201ENST00000510265 317 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 AC079598.5-201ENST00000547460 117 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 AC113403.1-201ENST00000604910 193 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 AC006111.3-201ENST00000622137 383 ntBASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGA11Q9Y5H2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR367-201ENST00000362299 68 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR331-201ENST00000362302 94 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 SNORD114-7-201ENST00000362520 77 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 Y_RNA.127-201ENST00000363386 109 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR192-201ENST00000384915 110 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 SNORD66.1-201ENST00000391230 76 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 RPL23AP58-201ENST00000440453 469 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 RN7SL810P-201ENST00000493031 276 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 SCARNA8-201ENST00000515924 131 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 RNU6-453P-201ENST00000516819 85 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 RNU6-971P-201ENST00000516920 106 ntBASIC4.16□□□□□ -1.74
PCDHGA11Q9Y5H2 AC112693.2-201ENST00000556538 232 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms