Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AL033523.1-201ENST00000605153 153 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 SCARNA4-201ENST00000629045 128 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AC103988.1-201ENST00000566382 2177 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 MIR190B-201ENST00000401119 79 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AL731563.1-201ENST00000442202 214 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AC091874.1-201ENST00000511402 339 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 MRPS36P4-201ENST00000534436 298 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AC022080.3-201ENST00000544433 482 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AC021231.3-201ENST00000558497 370 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 MIR5571-201ENST00000577998 113 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AC091903.1-201ENST00000624322 454 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB1Q9Y5F3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 SNORD56.3-201ENST00000363507 71 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 SNORD115-32-201ENST00000364079 82 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 CD24P4-201ENST00000382840 243 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 SNORA29-201ENST00000384183 140 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.574-201ENST00000384766 95 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-823P-201ENST00000391042 103 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 RNU4-47P-201ENST00000410876 114 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 RPL32P35-201ENST00000415214 394 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AL358453.1-201ENST00000422522 250 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AC009414.1-201ENST00000427200 443 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-567P-201ENST00000516746 107 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.721-201ENST00000517207 102 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 RPL23AP78-201ENST00000599928 470 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AL133393.1-201ENST00000603277 287 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 RPL23AP88-201ENST00000605759 454 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 RMST_6.1-201ENST00000611980 203 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 MIR1244-1-201ENST00000612829 85 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 MIR1244-3-201ENST00000635744 85 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 MIR1244-2-201ENST00000636449 85 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 MIR1244-4-202ENST00000636813 85 ntBASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHB1Q9Y5F3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.106-201ENST00000363189 100 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.401-201ENST00000383965 117 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 SNORA44-201ENST00000384584 132 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 MT-TR-201ENST00000387439 65 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 SNORA69.1-201ENST00000390904 137 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AL133475.1-201ENST00000404414 305 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 RPL21P40-201ENST00000428586 483 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC108059.2-201ENST00000434626 151 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AP001324.2-201ENST00000461163 319 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC109925.1-201ENST00000478069 331 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 RPL22P13-201ENST00000493291 347 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-911P-201ENST00000516523 104 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC004817.2-201ENST00000561794 651 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 MIR3136-201ENST00000583498 78 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC016727.2-201ENST00000603988 621 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AL359198.2-201ENST00000611836 194 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 MIR7106-201ENST00000612419 65 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AL159153.1-201ENST00000619688 317 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 U4.1-201ENST00000620349 87 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 UCA1.1-201ENST00000620952 75 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms