Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 HSPE1P4-201ENST00000550617 308 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 MIR4648-201ENST00000580107 72 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 MIR4513-201ENST00000581077 86 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 NIFKP6-201ENST00000598115 845 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 AC107304.1-201ENST00000604229 296 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 AL360219.1-201ENST00000610230 366 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 AC007671.2-201ENST00000637344 619 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 MTND4P23-201ENST00000447723 1363 ntBASIC1.07□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-500P-201ENST00000362349 107 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-203P-201ENST00000384038 104 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 SNORA70B-201ENST00000384210 135 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 RNU2-3P-201ENST00000410144 191 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC011233.1-201ENST00000422812 283 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC092447.3-201ENST00000426027 686 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC000111.3-201ENST00000433478 193 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC002486.1-201ENST00000435098 391 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC016925.1-201ENST00000458303 298 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 HMGN2P9-201ENST00000476875 229 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 MTND1P22-201ENST00000510572 951 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AF131216.2-201ENST00000512316 564 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 RNA5SP182-201ENST00000516064 82 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 RNU1-41P-201ENST00000516161 162 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 RNU1-48P-201ENST00000516400 162 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-567P-201ENST00000516746 107 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 SNORA31.16-201ENST00000516773 139 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 RNA5SP503-201ENST00000517047 117 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-685P-201ENST00000517088 95 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 CENPUP1-201ENST00000526649 1202 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC110588.1-201ENST00000559699 137 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 MIR4709-201ENST00000577272 72 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AL356157.2-201ENST00000605122 111 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC004223.4-201ENST00000612426 332 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC084768.2-201ENST00000622736 221 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 AC110994.2-201ENST00000635481 492 ntBASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHTOPQ9Y3Y2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 RNU4-1-201ENST00000363925 141 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AL049545.1-201ENST00000401856 572 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 RNU4-26P-201ENST00000410270 107 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 RNA5SP201-201ENST00000410316 124 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 RN7SKP61-201ENST00000410642 295 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 MTND5P25-201ENST00000430499 799 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 MTCO2P6-201ENST00000463134 685 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-1098P-201ENST00000516772 96 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 PCMTD1P2-201ENST00000565017 355 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AC090616.2-202ENST00000584248 222 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 BX248123.2-201ENST00000606318 124 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 MIR502-201ENST00000606349 86 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AC087241.4-201ENST00000612441 480 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AC079248.2-201ENST00000623779 326 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AC006927.3-201ENST00000638789 384 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 AC006026.1-201ENST00000444025 1803 ntBASIC1.05□□□□□ -2.24
CHTOPQ9Y3Y2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-37P-201ENST00000362692 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-11P-201ENST00000364234 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 SNORA72.2-201ENST00000365028 127 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 Y_RNA.324-201ENST00000365165 102 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-25P-201ENST00000383873 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-1-201ENST00000383898 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-116P-201ENST00000384042 109 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-48P-201ENST00000384161 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-36P-201ENST00000384172 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-4P-201ENST00000384205 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-5P-201ENST00000384238 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-3P-201ENST00000384314 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-16P-201ENST00000384385 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-45P-201ENST00000384471 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-15P-201ENST00000384534 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-2-201ENST00000384627 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-29P-201ENST00000384637 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-9-201ENST00000384776 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU6-33P-201ENST00000384793 107 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RNU2-8P-201ENST00000410727 190 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 AC004965.1-201ENST00000413033 213 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 AL365203.2-201ENST00000423444 196 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RPS6P15-201ENST00000431996 751 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 AL121601.2-201ENST00000438019 707 ntBASIC1.04□□□□□ -2.24
CHTOPQ9Y3Y2 RPL7P54-201ENST00000438336 674 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms