Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 MTCYBP9-201ENST00000431021 303 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 snoU13.14-201ENST00000459372 104 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 RN7SL293P-201ENST00000481765 281 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 RPL36AP48-201ENST00000485521 314 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 AC110794.1-201ENST00000505816 425 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 FCF1P8-201ENST00000510322 597 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 MTCO2P24-201ENST00000515611 426 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 RNU6-635P-201ENST00000516651 102 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 AC011471.1-201ENST00000585766 187 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 AC012314.7-201ENST00000619693 93 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 AC243829.7-201ENST00000633081 225 ntBASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
R3HCC1Q9Y3T6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 RNU4-35P-201ENST00000362588 141 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 Y_RNA.47-201ENST00000362697 108 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 RNA5SP119-201ENST00000362715 117 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 Y_RNA.210-201ENST00000364161 110 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 SNORA51.4-201ENST00000364993 124 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 RNU6-463P-201ENST00000384340 107 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 MIR186-201ENST00000384988 86 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 RN7SKP58-201ENST00000411010 305 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 AL445305.1-201ENST00000432577 575 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 AC010469.2-201ENST00000496412 480 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 HMGB1P35-201ENST00000503360 598 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 AP002770.2-201ENST00000543613 532 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 AC079598.5-201ENST00000547460 117 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 AL442163.3-201ENST00000554110 156 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 MIR3944-201ENST00000581277 108 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 MIR3922-201ENST00000585192 84 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.73□□□□□ -1.81
R3HCC1Q9Y3T6 Z75746.1-201ENST00000440243 2080 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 RNA5SP72-201ENST00000364442 117 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 RNA5SP213-201ENST00000391031 106 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 UBA52P6-201ENST00000399822 382 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 RPL32P35-201ENST00000415214 394 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 USP9YP16-201ENST00000430287 407 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 USP9YP23-201ENST00000455085 407 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 UBL5P4-201ENST00000562584 236 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 RPS29P30-201ENST00000600975 111 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AC073410.2-201ENST00000603240 332 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AP000942.4-201ENST00000604811 241 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 RAC1P9-201ENST00000604990 392 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 7SK.10-201ENST00000621414 298 ntBASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.72□□□□□ -1.81
R3HCC1Q9Y3T6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
R3HCC1Q9Y3T6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
R3HCC1Q9Y3T6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.27-201ENST00000362540 103 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-238P-201ENST00000363313 106 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.319-201ENST00000365138 92 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 SET-203ENST00000372688 801 ntTSL 2 BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.512-201ENST00000384518 102 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.551-201ENST00000384661 102 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-1109P-201ENST00000391187 107 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 U3.26-201ENST00000391236 204 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 BMS1P22-201ENST00000414726 313 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 EIF1P2-201ENST00000428233 350 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 RBMY2UP-201ENST00000453474 324 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-58P-201ENST00000517143 103 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 AC022868.1-201ENST00000517767 391 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 AC090517.1-201ENST00000569307 266 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 MIR4444-1-201ENST00000581696 74 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 MIR4503-201ENST00000582187 83 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 MIR3136-201ENST00000583498 78 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 MIR4444-2-201ENST00000584390 74 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 AC137590.2-201ENST00000619709 240 ntBASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms