Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC107032.1-201ENST00000485945 480 ntBASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 AC018868.1-201ENST00000491307 315 ntBASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-377P-201ENST00000515965 102 ntBASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 Y_RNA.693-201ENST00000516641 110 ntBASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 AC008749.1-201ENST00000597650 306 ntBASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 AC092954.2-201ENST00000609103 430 ntBASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 U2.17-201ENST00000611454 95 ntBASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 AC007792.1-201ENST00000623023 402 ntBASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.82□□□□□ -2.12
UBQLN1Q9UMX0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-527P-201ENST00000363425 104 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-1085P-201ENST00000363576 107 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-82P-201ENST00000363970 107 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-336P-201ENST00000364891 107 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-38P-201ENST00000384085 107 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RNA5SP213-201ENST00000391031 106 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AL591034.2-201ENST00000402839 359 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AC243964.1-201ENST00000441814 261 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 MTND1P1-201ENST00000445453 368 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-333P-201ENST00000459117 107 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 MTCO3P38-201ENST00000468910 766 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RPL30P12-201ENST00000474666 353 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 CYCSP27-201ENST00000527643 293 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AL118558.2-201ENST00000556294 238 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 MIR4529-201ENST00000578110 78 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 AC091135.1-201ENST00000585943 307 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 BNIP3P16-201ENST00000589779 534 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 VN1R107P-201ENST00000601784 209 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.81□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-428P-201ENST00000362942 107 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-623P-201ENST00000363143 105 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 RNU1-23P-201ENST00000363361 144 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-1285P-201ENST00000363480 105 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 Y_RNA.318-201ENST00000365131 97 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 RNU4-20P-201ENST00000365601 151 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-1222P-201ENST00000384615 107 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 MTCO3P41-201ENST00000414801 328 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 RPL39P29-201ENST00000447779 157 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 RPL30P1-201ENST00000488676 339 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AC009646.1-201ENST00000510455 318 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 SNORA4.4-201ENST00000515921 135 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AC069113.1-201ENST00000517763 267 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 CENPUP1-201ENST00000526649 1202 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 Z82243.1-201ENST00000609432 473 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AC022202.1-201ENST00000613515 211 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AC008121.3-201ENST00000618726 433 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AL162373.1-201ENST00000620433 407 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 SDR42E1P4-201ENST00000620894 481 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 AC090517.3-201ENST00000625170 141 ntBASIC1.8□□□□□ -2.12
UBQLN1Q9UMX0 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 Y_RNA.517-201ENST00000384551 106 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 MIR544A-201ENST00000384855 91 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 MIR514A2-201ENST00000385131 88 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 MIR514A3-201ENST00000385132 88 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-780P-201ENST00000391030 104 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AL121601.2-201ENST00000438019 707 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 MTCO2P7-201ENST00000446518 666 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AL353752.1-201ENST00000454946 260 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 SNORA14.1-201ENST00000516113 141 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-586P-201ENST00000517265 104 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 MIR4287-201ENST00000579398 78 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 VN1R80P-201ENST00000597126 338 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 AC103705.1-201ENST00000619013 241 ntBASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UBQLN1Q9UMX0 Y_RNA.167-201ENST00000363735 109 ntBASIC1.78□□□□□ -2.12
UBQLN1Q9UMX0 U3.13-201ENST00000364804 214 ntBASIC1.78□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-692P-201ENST00000384496 107 ntBASIC1.78□□□□□ -2.12
UBQLN1Q9UMX0 RNU6-1274P-201ENST00000384557 107 ntBASIC1.78□□□□□ -2.12
UBQLN1Q9UMX0 MIR561-201ENST00000385216 97 ntBASIC1.78□□□□□ -2.12
UBQLN1Q9UMX0 RNA5SP219-201ENST00000390940 113 ntBASIC1.78□□□□□ -2.12
UBQLN1Q9UMX0 RNU2-48P-201ENST00000410694 191 ntBASIC1.78□□□□□ -2.12
UBQLN1Q9UMX0 USP9YP18-201ENST00000425912 695 ntBASIC1.78□□□□□ -2.12
UBQLN1Q9UMX0 SNAP23P1-201ENST00000433229 246 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms