Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 DNAJC19P9-201ENST00000555084 351 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 Y_RNA.9-201ENST00000362354 101 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 RNU6-1068P-201ENST00000410958 103 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AL139109.1-201ENST00000455491 297 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 CBX3P7-201ENST00000532876 502 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AC107304.1-201ENST00000604229 296 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AC097372.5-201ENST00000623665 376 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 AC139792.2-201ENST00000624218 587 ntBASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHROOM4Q9ULL8 RNU6-827P-201ENST00000365553 106 ntBASIC3.78□□□□□ -1.8
SHROOM4Q9ULL8 Y_RNA.378-201ENST00000365652 113 ntBASIC3.78□□□□□ -1.8
SHROOM4Q9ULL8 Y_RNA.402-201ENST00000383972 102 ntBASIC3.78□□□□□ -1.8
SHROOM4Q9ULL8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.78□□□□□ -1.8
SHROOM4Q9ULL8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.78□□□□□ -1.8
SHROOM4Q9ULL8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.78□□□□□ -1.8
SHROOM4Q9ULL8 MIR5194-201ENST00000582634 120 ntBASIC3.78□□□□□ -1.8
SHROOM4Q9ULL8 AC068137.3-201ENST00000639191 341 ntBASIC3.78□□□□□ -1.8
SHROOM4Q9ULL8 Y_RNA.3-201ENST00000362331 103 ntBASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 AC019129.1-201ENST00000403786 261 ntBASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 AL121594.1-201ENST00000475906 575 ntBASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-826P-201ENST00000516827 104 ntBASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 AC118273.2-201ENST00000532092 465 ntBASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 AC103996.1-201ENST00000555468 102 ntBASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 ZNF720P1-201ENST00000562403 1939 ntBASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-336P-201ENST00000364891 107 ntBASIC3.76□□□□□ -1.81
SHROOM4Q9ULL8 AIMP1P2-201ENST00000425294 312 ntBASIC3.76□□□□□ -1.81
SHROOM4Q9ULL8 MTCO1P20-201ENST00000425366 358 ntBASIC3.76□□□□□ -1.81
SHROOM4Q9ULL8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.76□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-1037P-201ENST00000459571 107 ntBASIC3.76□□□□□ -1.81
SHROOM4Q9ULL8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.76□□□□□ -1.81
SHROOM4Q9ULL8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.76□□□□□ -1.81
SHROOM4Q9ULL8 AL357078.3-201ENST00000607528 618 ntBASIC3.76□□□□□ -1.81
SHROOM4Q9ULL8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 RNU1-72P-201ENST00000362976 153 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 RNA5SP160-201ENST00000364866 120 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 MIR9-3-201ENST00000385084 90 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 ERLEC1P1-201ENST00000433806 578 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 AC009238.1-201ENST00000442165 424 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 AC009237.6-201ENST00000446969 424 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-1069P-201ENST00000516612 133 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 AC087241.2-201ENST00000535801 324 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 MIR5089-201ENST00000580047 84 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-89P-201ENST00000606519 100 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 AC092807.2-201ENST00000609367 243 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 FER-210ENST00000628534 558 ntTSL 5 BASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.75□□□□□ -1.81
SHROOM4Q9ULL8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 OR4G1P-203ENST00000641984 1631 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-1032P-201ENST00000384100 107 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 RPS15AP10-201ENST00000432472 382 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 MTCO2P3-201ENST00000442543 421 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 AC087884.1-201ENST00000469738 328 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 RPL23AP63-201ENST00000498752 471 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 CYCSP26-201ENST00000534107 320 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 IMMP1LP2-201ENST00000552954 492 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 AC091135.1-201ENST00000585943 307 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 AC009314.1-201ENST00000603871 304 ntBASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SHROOM4Q9ULL8 U3.13-201ENST00000364804 214 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-1215P-201ENST00000384441 102 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-780P-201ENST00000391030 104 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 EIF4E2P1-201ENST00000393781 255 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-1208P-201ENST00000459588 107 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-323P-201ENST00000521915 107 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC093249.1-201ENST00000567049 203 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 U4.5-201ENST00000617137 123 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC090517.3-201ENST00000625170 141 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-1141P-201ENST00000364520 107 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU1-52P-201ENST00000384190 164 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 MIR29B2-201ENST00000385055 81 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU4-62P-201ENST00000410125 130 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AL117339.3-201ENST00000418733 162 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms