Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.16□□□□□ -1.74
CNTN3Q9P232 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CNTN3Q9P232 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNTN3Q9P232 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNTN3Q9P232 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNTN3Q9P232 FAM35DP-201ENST00000323387 2712 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 Y_RNA.8-201ENST00000362353 102 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 RNA5SP124-201ENST00000362739 110 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 RNA5SP322-201ENST00000363617 119 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.15□□□□□ -1.75
CNTN3Q9P232 RNU6-211P-201ENST00000384047 107 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 ELOCP21-201ENST00000412558 336 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 AL451074.5-201ENST00000415894 435 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.15□□□□□ -1.75
CNTN3Q9P232 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.15□□□□□ -1.75
CNTN3Q9P232 AL133547.1-201ENST00000448546 220 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 AL133162.1-201ENST00000463228 453 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 SNORA31.16-201ENST00000516773 139 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.15□□□□□ -1.75
CNTN3Q9P232 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.15□□□□□ -1.75
CNTN3Q9P232 MIR4644-201ENST00000579929 84 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 MIR3158-1-201ENST00000583596 81 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 AL121772.2-201ENST00000614331 297 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 snoU18.1-201ENST00000629629 71 ntBASIC4.15□□□□□ -1.75
CNTN3Q9P232 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.15□□□□□ -1.75
CNTN3Q9P232 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNTN3Q9P232 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNTN3Q9P232 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CNTN3Q9P232 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
CNTN3Q9P232 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNTN3Q9P232 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CNTN3Q9P232 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTN3Q9P232 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTN3Q9P232 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTN3Q9P232 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTN3Q9P232 Y_RNA.101-201ENST00000363154 102 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 RNU4-80P-201ENST00000363200 141 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 Y_RNA.398-201ENST00000383952 99 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CNTN3Q9P232 Y_RNA.580-201ENST00000391004 95 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 U3.26-201ENST00000391236 204 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 RNU2-54P-201ENST00000410299 190 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 RNA5SP475-201ENST00000410568 110 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.14□□□□□ -1.75
CNTN3Q9P232 AL161651.1-201ENST00000440882 223 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 AC009237.7-201ENST00000447357 229 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 AC091179.3-201ENST00000474761 144 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 RPL21P129-201ENST00000491732 478 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 AIG1P1-201ENST00000503376 148 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 RNA5SP164-201ENST00000516533 110 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.14□□□□□ -1.75
CNTN3Q9P232 AC105137.2-201ENST00000569073 466 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 MIR3923-201ENST00000579521 83 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 AC006133.1-201ENST00000617106 264 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 MTND1P7-201ENST00000632801 297 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CNTN3Q9P232 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNTN3Q9P232 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.14□□□□□ -1.75
CNTN3Q9P232 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNTN3Q9P232 UBE3AP2-201ENST00000429033 2259 ntBASIC4.14□□□□□ -1.75
CNTN3Q9P232 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CNTN3Q9P232 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNTN3Q9P232 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.13□□□□□ -1.75
CNTN3Q9P232 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CNTN3Q9P232 RNU6-653P-201ENST00000363074 106 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 SNORA18.3-201ENST00000384122 132 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 RNU1-89P-201ENST00000384592 164 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 SNORA48.7-201ENST00000391302 135 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 AL357139.1-201ENST00000407792 426 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 U3.39-201ENST00000408569 239 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 BMS1P22-201ENST00000414726 313 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 AC005300.1-201ENST00000428401 373 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.13□□□□□ -1.75
CNTN3Q9P232 RPL23AP62-201ENST00000463396 453 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 AC140059.1-201ENST00000489238 361 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 RNU6-155P-201ENST00000516347 100 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.13□□□□□ -1.75
CNTN3Q9P232 MIR4474-201ENST00000579189 78 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 AL133393.1-201ENST00000603277 287 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 RNU6-91P-201ENST00000607774 107 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 CR392039.5-201ENST00000623201 510 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 AC091932.3-201ENST00000624223 323 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 SNORD98-201ENST00000636377 67 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 MIR3674-201ENST00000636576 68 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 AC012442.3-202ENST00000636742 206 ntBASIC4.13□□□□□ -1.75
CNTN3Q9P232 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNTN3Q9P232 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNTN3Q9P232 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CNTN3Q9P232 IPO8P1-201ENST00000455509 3109 ntBASIC4.12□□□□□ -1.75
CNTN3Q9P232 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTN3Q9P232 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTN3Q9P232 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
CNTN3Q9P232 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTN3Q9P232 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.12□□□□□ -1.75
CNTN3Q9P232 RNU6-799P-201ENST00000363567 107 ntBASIC4.12□□□□□ -1.75
CNTN3Q9P232 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CNTN3Q9P232 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CNTN3Q9P232 MIR208B-201ENST00000401172 77 ntBASIC4.12□□□□□ -1.75
CNTN3Q9P232 RNU6-1199P-201ENST00000411249 104 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms