Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 AL359837.1-201ENST00000381357 287 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 SNORA5A-201ENST00000384111 134 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 Y_RNA.458-201ENST00000384240 102 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 MRPL35P1-201ENST00000404272 572 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 ELOCP20-201ENST00000422460 345 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 EIF1P2-201ENST00000428233 350 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 RPL21P2-201ENST00000440049 481 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 snoU13.14-201ENST00000459372 104 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 AC106707.2-201ENST00000484182 374 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 RN7SL283P-201ENST00000489055 303 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 AC091874.1-201ENST00000511402 339 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 RNU6-1012P-201ENST00000516606 109 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX1Q9NZR4 AC093023.1-201ENST00000547375 507 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.02□□□□□ -1.93
VSX1Q9NZR4 MIR3668-201ENST00000582138 75 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 RPS15AP11-201ENST00000594193 385 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 AL020997.2-201ENST00000602607 184 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
VSX1Q9NZR4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
VSX1Q9NZR4 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
VSX1Q9NZR4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 Y_RNA.518-201ENST00000384552 113 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 RNU6-159P-201ENST00000391080 106 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 RNA5SP252-201ENST00000391131 119 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 RNA5SP293-201ENST00000410527 113 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC096920.1-201ENST00000423991 241 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC092017.2-201ENST00000427600 362 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC104332.2-201ENST00000429959 156 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC096638.1-201ENST00000444678 216 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 HMGN1P18-201ENST00000457642 277 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC093663.1-201ENST00000497190 394 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AIG1P1-201ENST00000503376 148 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC022868.1-201ENST00000517767 391 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC007458.1-201ENST00000542812 373 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC078899.3-201ENST00000599065 212 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 AC093908.1-201ENST00000623125 8092 ntBASIC3.01□□□□□ -1.93
VSX1Q9NZR4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VSX1Q9NZR4 GABRG2-229ENST00000641017 3628 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 MAPK10-322ENST00000641485 4530 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 LINC02555-201ENST00000563933 1951 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
VSX1Q9NZR4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
VSX1Q9NZR4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3□□□□□ -1.93
VSX1Q9NZR4 RNU6-1301P-201ENST00000362724 104 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 Y_RNA.461-201ENST00000384263 103 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 RNU6-505P-201ENST00000384427 107 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 SNORD17-201ENST00000390930 237 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 UBA52P6-201ENST00000399822 382 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 MIR320B2-201ENST00000408479 138 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3□□□□□ -1.93
VSX1Q9NZR4 RPS15AP7-201ENST00000439294 405 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3□□□□□ -1.93
VSX1Q9NZR4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3□□□□□ -1.93
VSX1Q9NZR4 SNRPGP7-201ENST00000469016 106 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 RN7SL442P-201ENST00000473804 320 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 RPL30P12-201ENST00000474666 353 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 GZMAP1-201ENST00000503054 631 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3□□□□□ -1.93
VSX1Q9NZR4 RN7SKP49-201ENST00000516675 260 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 RNU6-58P-201ENST00000517143 103 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3□□□□□ -1.93
VSX1Q9NZR4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3□□□□□ -1.93
VSX1Q9NZR4 CYP4A27P-201ENST00000567218 190 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 AC005520.5-201ENST00000613926 164 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3□□□□□ -1.93
VSX1Q9NZR4 AC005296.1-201ENST00000616145 209 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 AC073476.4-201ENST00000628409 72 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 U6.92-201ENST00000636464 89 ntBASIC3□□□□□ -1.93
VSX1Q9NZR4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3□□□□□ -1.93
VSX1Q9NZR4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VSX1Q9NZR4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3□□□□□ -1.93
VSX1Q9NZR4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.99□□□□□ -1.93
VSX1Q9NZR4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.99□□□□□ -1.93
VSX1Q9NZR4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.99□□□□□ -1.93
VSX1Q9NZR4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VSX1Q9NZR4 RNA5SP197-201ENST00000363357 119 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 U8.10-201ENST00000384260 133 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 RNA5SP213-201ENST00000391031 106 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 RNU2-49P-201ENST00000410666 184 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 AC138623.1-201ENST00000418060 216 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 AL590135.1-201ENST00000422215 156 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 AC019205.3-201ENST00000424573 156 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 AC091286.1-201ENST00000431233 461 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.99□□□□□ -1.93
VSX1Q9NZR4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.99□□□□□ -1.93
VSX1Q9NZR4 LINC01399-202ENST00000458450 244 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 AC007215.1-201ENST00000464893 276 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 AP000870.1-201ENST00000472927 406 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 FCF1P8-201ENST00000510322 597 ntBASIC2.99□□□□□ -1.93
VSX1Q9NZR4 IGKV2-26-201ENST00000518305 343 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms