Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 Y_RNA.58-201ENST00000362807 102 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 Y_RNA.154-201ENST00000363624 102 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNU6-1059P-201ENST00000363752 98 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 SNORA68.1-201ENST00000364537 132 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNY3P1-201ENST00000365085 102 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNY3-201ENST00000365484 102 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 Y_RNA.490-201ENST00000384413 102 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNU6-843P-201ENST00000384454 104 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNU6-790P-201ENST00000384479 105 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNU6-748P-201ENST00000384648 107 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RPL37P10-201ENST00000412884 288 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 AC074085.1-201ENST00000413598 418 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 AL358075.3-201ENST00000426289 226 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RPL9P9-202ENST00000466501 579 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 SNORA31.18-201ENST00000517043 134 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 MIR5007-201ENST00000583098 95 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 AC104984.5-201ENST00000586878 94 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 AC016727.1-205ENST00000605437 569 ntBASIC2.19□□□□□ -2.06
NDE1Q9NXR1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NDE1Q9NXR1 RNU4-73P-201ENST00000363164 141 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 SNORA6-201ENST00000384033 151 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 RNU6-622P-201ENST00000384272 103 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 MIR544A-201ENST00000384855 91 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 MIR521-1-201ENST00000384902 87 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 RPS29P13-201ENST00000402041 169 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 U3.40-201ENST00000408706 208 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 RN7SKP158-201ENST00000410453 326 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC107083.1-201ENST00000439643 279 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC007969.2-201ENST00000441891 191 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 OSTCP8-201ENST00000445117 448 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 PCMTD1P1-201ENST00000455560 355 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC112771.1-201ENST00000463581 102 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 MTCO1P29-201ENST00000496868 288 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC091874.1-201ENST00000511402 339 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 RNU6-612P-201ENST00000516909 102 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 RNU6-1213P-201ENST00000517075 94 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC109329.2-201ENST00000519658 482 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC010186.2-204ENST00000537668 439 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AL355375.2-201ENST00000574825 175 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC090897.2-201ENST00000581715 130 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 FGF7P1-201ENST00000582820 288 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 ELOCP29-201ENST00000588193 334 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC103810.6-201ENST00000606708 136 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC025253.1-201ENST00000613623 543 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 AC104985.2-201ENST00000620598 500 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 MIR3529-201ENST00000637713 78 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 MIR7515-201ENST00000637837 67 ntBASIC2.18□□□□□ -2.06
NDE1Q9NXR1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NDE1Q9NXR1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NDE1Q9NXR1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NDE1Q9NXR1 OR56A5-201ENST00000340110 738 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 Y_RNA.67-201ENST00000362870 100 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AL355497.1-201ENST00000406262 551 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 RNU2-41P-201ENST00000410991 178 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AC138623.1-201ENST00000418060 216 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 USP9YP30-201ENST00000430729 455 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AL645568.3-201ENST00000433683 316 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 RPS15AP28-201ENST00000435088 386 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 FABP5P14-201ENST00000437273 393 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 SNORD109B-201ENST00000458961 67 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 SNORD109A-201ENST00000459128 67 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.17□□□□□ -2.06
NDE1Q9NXR1 MTND3P22-201ENST00000510932 243 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 Y_RNA.675-201ENST00000516389 149 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 RNU1-54P-201ENST00000517181 120 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms