Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 SNORD9-201ENST00000362566 104 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 Y_RNA.275-201ENST00000364726 110 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 RNU6-923P-201ENST00000364753 107 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 RNU6-217P-201ENST00000384164 104 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 MIR329-1-201ENST00000385028 80 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 SNORA53-201ENST00000391141 249 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 FTH1P15-201ENST00000406984 280 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 RPL21P66-201ENST00000426566 466 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 RPL23AP95-201ENST00000426806 265 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 RPS29P31-201ENST00000446147 164 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 NDUFB4P10-201ENST00000452541 359 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 snoU13.6-201ENST00000458785 104 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AP001025.1-201ENST00000486139 332 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AL391261.3-201ENST00000557194 520 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 MIR3158-1-201ENST00000583596 81 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AL078605.1-201ENST00000603529 500 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 IGHVIII-44-202ENST00000636235 289 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AC132825.6-201ENST00000638861 357 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AC009093.8-201ENST00000641769 292 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AC110774.1-201ENST00000623567 2018 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 RNU6-1020P-201ENST00000363684 107 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 RNU6-884P-201ENST00000363889 107 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 Y_RNA.319-201ENST00000365138 92 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 RNU1-100P-201ENST00000365255 165 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 RNU1-73P-201ENST00000383971 164 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 RNU6-541P-201ENST00000384709 110 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 Y_RNA.570-201ENST00000384750 101 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 MIR218-2-201ENST00000385006 110 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 Y_RNA.590-201ENST00000410140 107 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 EIF1AXP1-201ENST00000419267 435 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 CYCSP4-201ENST00000429682 331 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC124916.1-201ENST00000444020 547 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AP000705.1-201ENST00000454567 350 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 SNORA84-201ENST00000459229 133 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 RPS29P20-201ENST00000489592 171 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC091959.1-201ENST00000495857 238 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC104619.4-201ENST00000510773 249 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 RN7SKP49-201ENST00000516675 260 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC026403.1-201ENST00000518938 295 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 MIR4282-201ENST00000583613 67 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC008749.1-201ENST00000597650 306 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 Z83818.1-201ENST00000603584 150 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC039056.2-201ENST00000622261 511 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC012442.3-202ENST00000636742 206 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AC073073.2-201ENST00000609827 2578 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 MAPK10-362ENST00000641864 4484 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 AL353743.1-202ENST00000431724 1695 ntBASIC3.17□□□□□ -1.9
PARPBPQ9NWS1 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU6-1175P-201ENST00000365200 107 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNA5SP240-201ENST00000365355 128 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 Y_RNA.383-201ENST00000383855 97 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU6-1145P-201ENST00000384246 107 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU6-804P-201ENST00000384286 107 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU6-21P-201ENST00000384710 107 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 MIR544A-201ENST00000384855 91 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 MIR549A-201ENST00000385268 96 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU6-159P-201ENST00000391080 106 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU6-918P-201ENST00000391219 106 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU5A-5P-201ENST00000411054 116 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU2-61P-201ENST00000411069 191 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RPL19P1-201ENST00000411635 428 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 AC074117.2-201ENST00000417130 397 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 MTCO1P5-201ENST00000433573 344 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 MTATP6P7-201ENST00000453315 681 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RPS4XP22-201ENST00000480755 780 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 Y_RNA.679-201ENST00000516416 91 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 RNU6-58P-201ENST00000517143 103 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 AK6P2-201ENST00000549020 471 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 AC104465.1-201ENST00000611365 139 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 AC006133.1-201ENST00000617106 264 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms