Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 Y_RNA.83-201ENST00000363005 113 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 SNORA5B-201ENST00000363786 132 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 RNU1-140P-201ENST00000365040 165 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 RNU6-886P-201ENST00000384319 105 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 RNU4-47P-201ENST00000410876 114 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 RNU6-1245P-201ENST00000411130 106 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 EIF1AXP1-201ENST00000419267 435 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 EIF1P2-201ENST00000428233 350 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 AC107083.1-201ENST00000439643 279 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 AC104332.1-201ENST00000440471 797 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 MTATP6P7-201ENST00000453315 681 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 RPL23AP14-201ENST00000468281 468 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 AP000870.1-201ENST00000472927 406 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 AF186996.7-201ENST00000492781 209 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 SNORA31.1-201ENST00000515993 133 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 SNORA31.5-201ENST00000516190 133 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 U2.14-201ENST00000615943 113 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 XIST_intron.1-201ENST00000619444 68 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 U6.98-201ENST00000637157 84 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 U2.21-201ENST00000637295 81 ntBASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM7Q9NR12 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 RNU6-778P-201ENST00000363269 103 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 SNORD115-32-201ENST00000364079 82 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 RNU6-290P-201ENST00000365212 101 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 RNU6-217P-201ENST00000384164 104 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 Y_RNA.793-201ENST00000411222 111 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 AL445305.1-201ENST00000432577 575 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 RPS15AP7-201ENST00000439294 405 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 HSPE1P25-201ENST00000455484 251 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 AC087477.1-201ENST00000465747 340 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 MED28P2-201ENST00000475771 317 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 SNORA70.19-201ENST00000516717 90 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 HIGD1AP1-201ENST00000550979 275 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 AC093732.2-201ENST00000607950 274 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 U2.22-201ENST00000636441 106 ntBASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PDLIM7Q9NR12 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 AL353746.1-201ENST00000566293 6881 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RNU6-774P-201ENST00000363238 107 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RNA5SP197-201ENST00000363357 119 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 SNORD63-201ENST00000384262 68 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RNU6-1035P-201ENST00000384477 107 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 SNORD116-20-201ENST00000384529 92 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 MIR153-2-201ENST00000385225 87 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 Y_RNA.644-201ENST00000459006 113 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RPL7P47-201ENST00000497299 556 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 Y_RNA.674-201ENST00000516362 113 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RNU6-789P-201ENST00000517105 102 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 AL513302.2-201ENST00000562313 1842 ntBASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM7Q9NR12 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 RNA5SP361-201ENST00000362686 118 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 RNU4-90P-201ENST00000362773 141 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 Y_RNA.199-201ENST00000364014 102 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 SNORD32A-201ENST00000364805 84 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 RNU1-73P-201ENST00000383971 164 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms