Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 Y_RNA.9-201ENST00000362354 101 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-743P-201ENST00000364151 106 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-1141P-201ENST00000364520 107 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-1329P-201ENST00000365664 107 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 Y_RNA.402-201ENST00000383972 102 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 Y_RNA.450-201ENST00000384198 113 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 MIR29B2-201ENST00000385055 81 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 SNORA12-201ENST00000391162 147 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 EIF4E2P1-201ENST00000393781 255 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 MIR548F1-201ENST00000408667 84 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 RNU4-26P-201ENST00000410270 107 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 RNA5SP270-201ENST00000411361 118 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AL030996.1-201ENST00000411430 235 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 EDDM3CP-201ENST00000415977 425 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AL139413.1-201ENST00000421309 217 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AC034114.1-201ENST00000520293 285 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AC009127.3-201ENST00000570531 403 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AL034555.1-201ENST00000604816 211 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AC104458.1-201ENST00000608243 463 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AL161423.1-201ENST00000613700 262 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 FAM157A-202ENST00000615155 405 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AC024614.3-201ENST00000637860 256 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 AC068137.4-201ENST00000638485 296 ntBASIC1.83□□□□□ -2.12
EXOSC3Q9NQT5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 RNU4-15P-201ENST00000362613 141 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 Y_RNA.256-201ENST00000364594 104 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-546P-201ENST00000383991 107 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 Y_RNA.504-201ENST00000384481 104 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-1106P-201ENST00000390845 107 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-332P-201ENST00000391193 108 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 SNORD115-47-201ENST00000391226 86 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AC027124.2-201ENST00000428249 105 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AL359672.1-201ENST00000442302 409 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-1037P-201ENST00000459571 107 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 HMGN2P26-201ENST00000463169 339 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AC145146.1-201ENST00000496370 254 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AC092436.3-201ENST00000511788 257 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 MIR514B-201ENST00000516774 80 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 RN7SKP256-201ENST00000517201 314 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AC107953.1-201ENST00000522216 297 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 TRAV32-201ENST00000553993 340 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 AC012640.5-201ENST00000623897 319 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 MTND4P23-201ENST00000447723 1363 ntBASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
EXOSC3Q9NQT5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC121333.1-201ENST00000567488 2709 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 RNY4P14-201ENST00000363656 96 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 SNORA36A-201ENST00000384221 132 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 MIR450B-201ENST00000401182 78 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 RNU2-48P-201ENST00000410694 191 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AL590556.1-201ENST00000423231 483 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 MTND3P9-201ENST00000429526 346 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AMD1P1-201ENST00000457220 922 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 MIR449C-201ENST00000516047 92 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-612P-201ENST00000516909 102 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC007375.1-201ENST00000554513 578 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 RPS3AP23-202ENST00000574601 686 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AL031274.2-201ENST00000599419 203 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AC078795.3-201ENST00000602913 472 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 DUXAP9-208ENST00000622815 614 ntBASIC1.81□□□□□ -2.12
EXOSC3Q9NQT5 Y_RNA.89-201ENST00000363031 102 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-254P-201ENST00000363377 107 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-1317P-201ENST00000364582 104 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 SNORA67.3-201ENST00000384366 140 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms