Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AP001324.2-201ENST00000461163 319 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 AC027575.1-201ENST00000481064 460 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.56□□□□□ -2
PCDH9Q9HC56 SNORA25.11-201ENST00000515935 105 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 RNA5SP384-201ENST00000516615 116 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.56□□□□□ -2
PCDH9Q9HC56 BNIP3P16-201ENST00000589779 534 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 AL391813.1-201ENST00000603098 260 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 AC080078.3-201ENST00000605407 463 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.56□□□□□ -2
PCDH9Q9HC56 AL160413.1-201ENST00000622780 310 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
PCDH9Q9HC56 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.56□□□□□ -2
PCDH9Q9HC56 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.56□□□□□ -2
PCDH9Q9HC56 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDH9Q9HC56 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
PCDH9Q9HC56 RNU6-227P-201ENST00000362865 103 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 Y_RNA.394-201ENST00000383942 103 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 Y_RNA.431-201ENST00000384086 102 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 RNU6-748P-201ENST00000384648 107 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 BTF3L4P2-201ENST00000392798 346 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.55□□□□□ -2
PCDH9Q9HC56 MTND1P14-201ENST00000427400 950 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.55□□□□□ -2
PCDH9Q9HC56 DAP3P1-201ENST00000441522 278 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AC007969.2-201ENST00000441891 191 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AL031659.1-201ENST00000447075 539 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 RPL31P41-201ENST00000477967 372 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AP001025.1-201ENST00000486139 332 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AC114801.2-201ENST00000503825 781 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.55□□□□□ -2
PCDH9Q9HC56 SMURF2P1-201ENST00000514992 481 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.55□□□□□ -2
PCDH9Q9HC56 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.55□□□□□ -2
PCDH9Q9HC56 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.55□□□□□ -2
PCDH9Q9HC56 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.55□□□□□ -2
PCDH9Q9HC56 AP001836.1-201ENST00000604675 523 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.55□□□□□ -2
PCDH9Q9HC56 MIR8076-201ENST00000611401 83 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 AC009541.1-201ENST00000438279 2662 ntBASIC2.55□□□□□ -2
PCDH9Q9HC56 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
PCDH9Q9HC56 Y_RNA.146-201ENST00000363549 102 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 U3.13-201ENST00000364804 214 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 RNU6-43P-201ENST00000384302 107 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 Y_RNA.510-201ENST00000384511 114 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 MIR634-201ENST00000385208 97 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 BX276092.3-201ENST00000424182 230 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 RPS15AP7-201ENST00000439294 405 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.54□□□□□ -2
PCDH9Q9HC56 RPS29P27-201ENST00000463711 170 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 AC097473.1-201ENST00000508142 408 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 AC005741.1-201ENST00000511094 432 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 AC093303.1-201ENST00000514549 295 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 RNU6-120P-201ENST00000516077 103 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 RNA5SP320-201ENST00000516263 124 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 SCARNA16.2-201ENST00000516520 172 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.54□□□□□ -2
PCDH9Q9HC56 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 SCARNA15.3-201ENST00000626315 122 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 SCARNA4.1-201ENST00000628597 123 ntBASIC2.54□□□□□ -2
PCDH9Q9HC56 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
PCDH9Q9HC56 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PCDH9Q9HC56 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PCDH9Q9HC56 RNU1-138P-201ENST00000384093 164 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 RNU6-890P-201ENST00000384121 107 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 AF228730.4-201ENST00000421457 183 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 AL358075.3-201ENST00000426289 226 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
PCDH9Q9HC56 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.53□□□□□ -2
PCDH9Q9HC56 Z98742.2-201ENST00000431564 187 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 OSTCP8-201ENST00000445117 448 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 RPL39P29-201ENST00000447779 157 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 RPS3P1-201ENST00000456781 192 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 MIR2053-201ENST00000459295 91 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 AC112771.1-201ENST00000463581 102 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.53□□□□□ -2
PCDH9Q9HC56 AC091874.1-201ENST00000511402 339 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 RNU6-1170P-201ENST00000515974 106 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 RNU5B-3P-201ENST00000516601 115 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 Y_RNA.701-201ENST00000516812 110 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 RNU1-104P-201ENST00000517280 175 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.53□□□□□ -2
PCDH9Q9HC56 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 MIR4446-201ENST00000578505 67 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 MIR3162-201ENST00000581818 82 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 AC133104.2-201ENST00000615272 193 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 HMGB1P24-202ENST00000615653 685 ntBASIC2.53□□□□□ -2
PCDH9Q9HC56 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCDH9Q9HC56 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCDH9Q9HC56 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms