Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC092628.2-201ENST00000622492 339 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 CR392039.5-201ENST00000623201 510 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AC012442.3-202ENST00000636742 206 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AL353746.1-201ENST00000566293 6881 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 UBE2WP1-201ENST00000362030 340 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 Y_RNA.230-201ENST00000364348 109 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 SNORA73.2-201ENST00000364946 201 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 AL359837.1-201ENST00000381357 287 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 MIR607-201ENST00000385241 96 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 RN7SKP27-201ENST00000410684 333 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 RPL23AP36-201ENST00000413895 458 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 AL358075.3-201ENST00000426289 226 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 GOT2P5-201ENST00000433995 546 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 AC244670.1-201ENST00000436879 112 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 AC012308.1-201ENST00000451232 178 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-1219P-201ENST00000516143 112 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 MRPS18CP4-201ENST00000535821 231 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 MIR3145-201ENST00000580727 82 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 AC010999.1-201ENST00000611856 324 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 U6.106-201ENST00000636360 105 ntBASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A2Q9H9S3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 SNORA72.2-201ENST00000365028 127 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 Y_RNA.398-201ENST00000383952 99 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 SNORA46.1-201ENST00000391069 153 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 MIR888-201ENST00000401186 77 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 Y_RNA.595-201ENST00000410403 105 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 Y_RNA.597-201ENST00000410463 100 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 AL390729.2-201ENST00000416137 156 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 YPEL5P1-201ENST00000419731 367 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 AC099548.1-201ENST00000421443 426 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 RPS29P31-201ENST00000446147 164 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 UQCRBP2-201ENST00000447827 297 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 RNU7-200P-201ENST00000516105 62 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 SNORA67.7-201ENST00000516664 135 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-1198P-201ENST00000516904 67 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 AC016256.1-201ENST00000547971 354 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 MIR3144-201ENST00000579460 79 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 MIR4425-201ENST00000580572 84 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 MIR4308-201ENST00000580634 81 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 MIR3158-1-201ENST00000583596 81 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 RNU1-30P-201ENST00000606575 163 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 AC006133.1-201ENST00000617106 264 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 AC048347.1-201ENST00000624621 427 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 AP000553.6-201ENST00000641242 118 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 ZNF204P-201ENST00000416749 2397 ntBASIC3.25□□□□□ -1.89
SEC61A2Q9H9S3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 ADAM3A-203ENST00000461344 2157 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 Y_RNA.136-201ENST00000363444 102 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-137P-201ENST00000363680 108 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 Y_RNA.240-201ENST00000364469 95 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 RN7SKP61-201ENST00000410642 295 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 RPL39P29-201ENST00000447779 157 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AL133547.1-201ENST00000448546 220 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AC009163.5-201ENST00000575421 637 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AL713866.2-201ENST00000603579 219 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AC024220.1-201ENST00000603675 484 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AC068831.7-201ENST00000616954 363 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AC073349.3-201ENST00000617616 186 ntBASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.24□□□□□ -1.89
SEC61A2Q9H9S3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms