Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS16Q9H269 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS16Q9H269 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS16Q9H269 AC099654.7-201ENST00000635788 2127 ntBASIC3.1□□□□□ -1.91
VPS16Q9H269 RNU6-942P-201ENST00000363002 107 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 Y_RNA.210-201ENST00000364161 110 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 RNU4-42P-201ENST00000364738 142 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 RNU6-472P-201ENST00000384299 107 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 RNU6-1026P-201ENST00000384465 108 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 RNU6-790P-201ENST00000384479 105 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 FTH1P15-201ENST00000406984 280 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 AL358075.3-201ENST00000426289 226 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 RPS15AP10-201ENST00000432472 382 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 DAP3P1-201ENST00000441522 278 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS16Q9H269 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VPS16Q9H269 PCNPP5-201ENST00000452246 481 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS16Q9H269 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 MRPL42P6-201ENST00000486397 371 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
VPS16Q9H269 ACA59.2-201ENST00000517061 156 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VPS16Q9H269 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS16Q9H269 HSBP1P1-201ENST00000555205 166 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 MIR5188-201ENST00000583467 113 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 AC023043.3-201ENST00000593113 385 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 MIR3976-201ENST00000606807 139 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 U2.1-201ENST00000618978 145 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 U4.7-201ENST00000638126 106 ntBASIC3.09□□□□□ -1.91
VPS16Q9H269 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS16Q9H269 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS16Q9H269 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS16Q9H269 RNU6-858P-201ENST00000362436 107 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 RNU6-78P-201ENST00000362897 107 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 Y_RNA.380-201ENST00000365663 111 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 Y_RNA.556-201ENST00000384677 113 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 Y_RNA.577-201ENST00000384794 101 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 RPL21P1-201ENST00000399532 476 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 MIR1252-201ENST00000408861 65 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 RNU6-1156P-201ENST00000410365 100 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AC009414.1-201ENST00000427200 443 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AC012308.1-201ENST00000451232 178 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS16Q9H269 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS16Q9H269 RAC1P5-201ENST00000512182 576 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AC091826.1-201ENST00000514065 313 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 Y_RNA.715-201ENST00000517082 110 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS16Q9H269 AP000889.1-201ENST00000530968 660 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AC010186.2-204ENST00000537668 439 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AC009163.5-201ENST00000575421 637 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AL158827.2-201ENST00000602494 330 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AL391813.1-201ENST00000603098 260 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AC100812.1-201ENST00000607622 580 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 UCA1.1-201ENST00000620952 75 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 MIR8057-201ENST00000620957 69 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 AL691447.3-201ENST00000635020 330 ntBASIC3.08□□□□□ -1.92
VPS16Q9H269 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS16Q9H269 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS16Q9H269 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VPS16Q9H269 MIR422A-201ENST00000362286 90 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 MIR208A-201ENST00000362287 71 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 RNY1P16-201ENST00000363063 111 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 Y_RNA.424-201ENST00000384063 103 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 RNU6-748P-201ENST00000384648 107 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 DYNLT3P2-201ENST00000442517 295 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 OSTCP8-201ENST00000445117 448 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS16Q9H269 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS16Q9H269 RPS29P12-201ENST00000460178 152 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 AC107626.1-201ENST00000471084 183 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 RN7SL297P-201ENST00000483161 293 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 AC104564.1-201ENST00000493028 407 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS16Q9H269 SNORA9.3-201ENST00000516383 129 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 SNORA40.14-201ENST00000516543 86 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 RNU6-388P-201ENST00000517012 105 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 RNU6-389P-201ENST00000517048 105 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS16Q9H269 ZNF861P-201ENST00000588126 639 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 Z98751.3-201ENST00000604447 521 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS16Q9H269 AC062037.2-201ENST00000610137 73 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 MIR8062-201ENST00000621515 85 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 MIR3529-201ENST00000637713 78 ntBASIC3.07□□□□□ -1.92
VPS16Q9H269 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS16Q9H269 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VPS16Q9H269 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS16Q9H269 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS16Q9H269 Y_RNA.26-201ENST00000362539 101 ntBASIC3.06□□□□□ -1.92
VPS16Q9H269 Y_RNA.222-201ENST00000364264 102 ntBASIC3.06□□□□□ -1.92
VPS16Q9H269 RNU6-1317P-201ENST00000364582 104 ntBASIC3.06□□□□□ -1.92
VPS16Q9H269 U8.8-201ENST00000365399 135 ntBASIC3.06□□□□□ -1.92
VPS16Q9H269 SNORD14.1-201ENST00000365609 90 ntBASIC3.06□□□□□ -1.92
VPS16Q9H269 Y_RNA.533-201ENST00000384596 114 ntBASIC3.06□□□□□ -1.92
VPS16Q9H269 AL512633.1-201ENST00000399931 655 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms