Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 MRPS17P9-201ENST00000511924 393 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 MIR449C-201ENST00000516047 92 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 HSPE1P18-201ENST00000517602 280 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 HSPE1P4-201ENST00000550617 308 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 AC007375.1-201ENST00000554513 578 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 AC087683.1-201ENST00000591187 441 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 AC243960.4-201ENST00000600532 288 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 AL078605.1-201ENST00000603529 500 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 AL356157.2-201ENST00000605122 111 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 AC087241.4-201ENST00000612441 480 ntBASIC1.92□□□□□ -2.1
DDX47Q9H0S4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
DDX47Q9H0S4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
DDX47Q9H0S4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 RNA5SP219-201ENST00000390940 113 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 AC078809.1-201ENST00000427601 140 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX47Q9H0S4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.91□□□□□ -2.1
DDX47Q9H0S4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX47Q9H0S4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.91□□□□□ -2.1
DDX47Q9H0S4 MTND2P38-201ENST00000522536 667 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.91□□□□□ -2.1
DDX47Q9H0S4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.91□□□□□ -2.1
DDX47Q9H0S4 MIR4298-201ENST00000584380 73 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 AP000654.2-201ENST00000605633 586 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
DDX47Q9H0S4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.91□□□□□ -2.1
DDX47Q9H0S4 RNU1-58P-201ENST00000362413 163 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 SNORD48-201ENST00000364953 64 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 SNORD116-1-201ENST00000384335 95 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 SNORA26.3-201ENST00000391119 136 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AL133396.1-201ENST00000432048 687 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AL121601.2-201ENST00000438019 707 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.9□□□□□ -2.11
DDX47Q9H0S4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.9□□□□□ -2.11
DDX47Q9H0S4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AC091874.1-201ENST00000511402 339 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.9□□□□□ -2.11
DDX47Q9H0S4 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 MTND1P15-201ENST00000579262 949 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.9□□□□□ -2.11
DDX47Q9H0S4 VN1R80P-201ENST00000597126 338 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AC005034.5-201ENST00000604219 466 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AP001836.1-201ENST00000604675 523 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 AC017083.3-201ENST00000609955 700 ntBASIC1.9□□□□□ -2.11
DDX47Q9H0S4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
DDX47Q9H0S4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
DDX47Q9H0S4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC092268.1-201ENST00000342691 405 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 SNORD73A-201ENST00000386062 65 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 MTCYBP2-201ENST00000407745 171 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 RNA5SP201-201ENST00000410316 124 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AL663109.1-201ENST00000411498 844 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AL513124.1-201ENST00000450410 614 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 RNU7-138P-201ENST00000459479 64 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 SNORA14.1-201ENST00000516113 141 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AP003034.1-201ENST00000534621 422 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC024614.2-201ENST00000577584 372 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AP001330.5-201ENST00000607176 411 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC139792.3-201ENST00000623525 224 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 AL450472.1-202ENST00000637286 180 ntBASIC1.89□□□□□ -2.11
DDX47Q9H0S4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
DDX47Q9H0S4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
DDX47Q9H0S4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
DDX47Q9H0S4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.88□□□□□ -2.11
DDX47Q9H0S4 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
DDX47Q9H0S4 MTCO3P38-201ENST00000468910 766 ntBASIC1.88□□□□□ -2.11
DDX47Q9H0S4 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
DDX47Q9H0S4 AC016632.1-201ENST00000503994 196 ntBASIC1.88□□□□□ -2.11
DDX47Q9H0S4 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
DDX47Q9H0S4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.88□□□□□ -2.11
DDX47Q9H0S4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.88□□□□□ -2.11
DDX47Q9H0S4 AC078795.3-201ENST00000602913 472 ntBASIC1.88□□□□□ -2.11
DDX47Q9H0S4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
DDX47Q9H0S4 RNU4-56P-201ENST00000364700 142 ntBASIC1.87□□□□□ -2.11
DDX47Q9H0S4 Y_RNA.409-201ENST00000383990 98 ntBASIC1.87□□□□□ -2.11
DDX47Q9H0S4 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
DDX47Q9H0S4 AL357139.1-201ENST00000407792 426 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms