Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MIR8069-1-201ENST00000616627 86 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 MIR8069-2-201ENST00000621412 86 ntBASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP3Q9BZ76 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 MIR494-201ENST00000349529 81 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 RNA5SP130-201ENST00000364431 114 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 Y_RNA.466-201ENST00000384294 113 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 MIR493-201ENST00000385254 89 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 SNORA26.3-201ENST00000391119 136 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 SNORA48.5-201ENST00000391143 135 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 SNORA79-201ENST00000408376 140 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 NDUFS5P4-201ENST00000412983 318 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 HMGB1P37-201ENST00000439613 609 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 RPL39P40-201ENST00000445481 146 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 RPS4XP2-201ENST00000458402 793 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AC023141.12-201ENST00000512399 199 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 RNA5SP281-201ENST00000516504 135 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AC025647.1-201ENST00000517879 253 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 CR383656.8-201ENST00000549046 145 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AL356575.1-201ENST00000603008 283 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 RNU6-94P-201ENST00000607728 107 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 MIR6715A-201ENST00000615929 79 ntBASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CNTNAP3Q9BZ76 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 AL133383.2-201ENST00000622958 2336 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 AC092268.1-201ENST00000342691 405 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 SNORD56.1-201ENST00000362913 68 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 Y_RNA.361-201ENST00000365515 120 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 SNORD18B-201ENST00000365659 72 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 RNU6-1014P-201ENST00000383940 103 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 RNU6-1124P-201ENST00000384169 107 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 Y_RNA.549-201ENST00000384657 102 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 AC125238.1-201ENST00000448842 249 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 SNRPGP7-201ENST00000469016 106 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 RN7SL585P-201ENST00000470538 280 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 Vault.1-201ENST00000516474 102 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 RNU6-197P-201ENST00000516680 100 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 TRAV8-5-201ENST00000537369 341 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 AC020895.1-201ENST00000595362 272 ntBASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.31□□□□□ -1.72
CNTNAP3Q9BZ76 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 RNY1P10-201ENST00000363268 113 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 RNA5SP125-201ENST00000364843 120 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 RNU6-1113P-201ENST00000384348 107 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 Z98745.1-201ENST00000402553 494 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 AC006517.1-201ENST00000480485 328 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 AC078817.1-201ENST00000492623 435 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 RNA5SP360-201ENST00000516555 118 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 AC026403.1-201ENST00000518938 295 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.3□□□□□ -1.72
CNTNAP3Q9BZ76 AC107068.1-201ENST00000563286 4218 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 RNU6-50P-201ENST00000362356 103 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 RNU1-100P-201ENST00000365255 165 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 Y_RNA.415-201ENST00000384012 112 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 MIR544A-201ENST00000384855 91 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms