Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 Y_RNA.220-201ENST00000364244 109 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 Y_RNA.544-201ENST00000384650 113 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 RPL39P40-201ENST00000445481 146 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 RPL31P41-201ENST00000477967 372 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 RN7SL271P-201ENST00000487601 295 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 RNA5SP395-201ENST00000516567 118 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 RNU6-197P-201ENST00000516680 100 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 AC015720.1-201ENST00000565251 277 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 MIR4716-201ENST00000579628 84 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 AC012493.2-201ENST00000595083 291 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 AL021997.2-201ENST00000615674 271 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 ADAM5-202ENST00000399789 1942 ntBASIC4.29□□□□□ -1.72
COL25A1Q9BXS0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 SCN1A-220ENST00000641603 12506 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 RNU1-20P-201ENST00000363314 162 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 Y_RNA.361-201ENST00000365515 120 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 NDUFS5P4-201ENST00000412983 318 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 SNRPEP9-201ENST00000436794 238 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 AC022790.1-201ENST00000522872 204 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 CR383656.8-201ENST00000549046 145 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 MIR4512-201ENST00000583257 77 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 SNORD84-203ENST00000584275 78 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 AC090132.2-201ENST00000615881 347 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 AC073136.1-201ENST00000449426 2884 ntBASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.28□□□□□ -1.72
COL25A1Q9BXS0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
COL25A1Q9BXS0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.73
COL25A1Q9BXS0 LINC01355-201ENST00000566551 5444 ntBASIC4.28□□□□□ -1.73
COL25A1Q9BXS0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 Z82217.1-201ENST00000625157 8149 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 AC058791.1-201ENST00000608412 3198 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 MIR449A-201ENST00000362113 91 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 U1.1-201ENST00000384101 164 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 RNA5SP225-201ENST00000410874 135 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 AL445687.1-201ENST00000439946 251 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 RNA5SP281-201ENST00000516504 135 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 AC025647.1-201ENST00000517879 253 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 IGKV1-22-201ENST00000524313 326 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 AC006023.1-201ENST00000603944 259 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 YPEL5P2-201ENST00000605553 359 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 MIR7151-201ENST00000617477 60 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 MIR7111-201ENST00000619751 72 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 AL049781.1-201ENST00000623195 3585 ntBASIC4.27□□□□□ -1.73
COL25A1Q9BXS0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 RNU6-228P-201ENST00000362700 106 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 SNORA80A-201ENST00000363922 136 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 RNA5SP125-201ENST00000364843 120 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 RNU6-1113P-201ENST00000384348 107 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 Y_RNA.549-201ENST00000384657 102 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 SNORA3C-201ENST00000408792 125 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 RPS26P47-201ENST00000427219 348 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 AC010469.1-201ENST00000463864 576 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 RPL35AP15-201ENST00000468042 339 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 RNA5SP291-201ENST00000517222 105 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 MIR3921-201ENST00000577308 85 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
COL25A1Q9BXS0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 RNU6-1014P-201ENST00000383940 103 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 MIR320B2-201ENST00000408479 138 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 HSPE1P12-201ENST00000412576 301 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 430.9 ms