Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 Y_RNA.200-201ENST00000364018 102 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 MIR30B-201ENST00000384850 88 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 MIR7-3-201ENST00000384898 110 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 MIR449B-201ENST00000384995 97 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 MIR1298-201ENST00000408783 112 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 WARS2P1-201ENST00000429678 537 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 RPS29P12-201ENST00000460178 152 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 CKS1BP7-201ENST00000522230 235 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 HSPE1P4-201ENST00000550617 308 ntBASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
YIPF4Q9BSR8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 RNU6-961P-201ENST00000363893 105 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 SNORD46.1-201ENST00000364139 104 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 RNU6-886P-201ENST00000384319 105 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 MIR329-1-201ENST00000385028 80 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 U3.19-201ENST00000390893 196 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 RNU6-159P-201ENST00000391080 106 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AL512633.1-201ENST00000399931 655 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 YME1L1P1-201ENST00000429435 297 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 RN7SKP49-201ENST00000516675 260 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 RNU6-567P-201ENST00000516746 107 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 RNU6-58P-201ENST00000517143 103 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 CYCSP30-201ENST00000546447 172 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AC016256.1-201ENST00000547971 354 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AL078605.1-201ENST00000603529 500 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AL356157.2-201ENST00000605122 111 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 SNORA62.6-201ENST00000606322 83 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AL357075.2-201ENST00000614906 189 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AC039056.2-201ENST00000622261 511 ntBASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
YIPF4Q9BSR8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 RNU4-90P-201ENST00000362773 141 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 RN7SKP156-201ENST00000410308 342 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 RN7SKP61-201ENST00000410642 295 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 RNU6-651P-201ENST00000411040 105 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 AC073901.1-201ENST00000462471 408 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 RPL7P49-201ENST00000471402 708 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 SCARNA14-201ENST00000516903 136 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 CBX3P4-201ENST00000538909 354 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 AC008011.1-201ENST00000545989 227 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 MIR5047-201ENST00000579212 100 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 AL133393.1-201ENST00000603277 287 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 AC005296.1-201ENST00000616145 209 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 RBBP8P1-201ENST00000449447 1844 ntBASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.51□□□□□ -1.85
YIPF4Q9BSR8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AL161912.2-201ENST00000565707 3007 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AC092435.3-201ENST00000565538 3654 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 RNU6-1141P-201ENST00000364520 107 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 RNU6-622P-201ENST00000384272 103 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 SNORA3.3-201ENST00000408712 125 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 GPM6BP3-201ENST00000442797 145 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 RPL31P41-201ENST00000477967 372 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 SEM1P1-201ENST00000506694 209 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 RN7SKP83-201ENST00000516512 178 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 SCARNA11.3-201ENST00000517276 130 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AC012493.2-201ENST00000595083 291 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AC084757.4-201ENST00000616350 526 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AC002064.3-201ENST00000623448 346 ntBASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
YIPF4Q9BSR8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 MFSD8-236ENST00000641509 4050 ntBASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 SNORA71.3-201ENST00000362582 128 ntBASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 Y_RNA.83-201ENST00000363005 113 ntBASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 RNU6-1285P-201ENST00000363480 105 ntBASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 SNORD115-8-201ENST00000363856 82 ntBASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 RNA5SP387-201ENST00000364226 106 ntBASIC3.49□□□□□ -1.85
YIPF4Q9BSR8 SNORD115-38-201ENST00000365037 82 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms