Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 AL034555.1-201ENST00000604816 211 ntBASIC1.7□□□□□ -2.14
KLHDC3Q9BQ90 AL132822.1-201ENST00000617063 513 ntBASIC1.7□□□□□ -2.14
KLHDC3Q9BQ90 AC068792.1-201ENST00000621354 417 ntBASIC1.7□□□□□ -2.14
KLHDC3Q9BQ90 AL359880.1-201ENST00000621879 266 ntBASIC1.7□□□□□ -2.14
KLHDC3Q9BQ90 AC124864.2-201ENST00000624736 186 ntBASIC1.7□□□□□ -2.14
KLHDC3Q9BQ90 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.7□□□□□ -2.14
KLHDC3Q9BQ90 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 RNU6-1085P-201ENST00000363576 107 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 SNORA69-201ENST00000383895 132 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 MTCO3P40-201ENST00000392516 676 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AL356432.1-201ENST00000405809 419 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 Y_RNA.597-201ENST00000410463 100 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 RN7SKP61-201ENST00000410642 295 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 CYCSP49-201ENST00000420810 319 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AL513124.1-201ENST00000450410 614 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 TPTE2P5-203ENST00000458118 728 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 snoU13.15-201ENST00000459407 104 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 MTCO3P38-201ENST00000468910 766 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 RPL23AP42-201ENST00000471152 471 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AC107401.1-201ENST00000503426 685 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AC103996.1-201ENST00000555468 102 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AC103705.1-201ENST00000619013 241 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 AC005858.4-201ENST00000623191 700 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 SNORD98-201ENST00000636377 67 ntBASIC1.69□□□□□ -2.14
KLHDC3Q9BQ90 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 Y_RNA.194-201ENST00000363985 102 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 RNU4-24P-201ENST00000364565 139 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 SNORD32A-201ENST00000364805 84 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 Y_RNA.409-201ENST00000383990 98 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 RNU6-142P-201ENST00000384019 107 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 MIR29C-201ENST00000385231 88 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 U8.13-201ENST00000390842 128 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 RNU6-1106P-201ENST00000390845 107 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 SNORA40.18-201ENST00000391200 128 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 POLHP1-201ENST00000411806 470 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 RPL23AP95-201ENST00000426806 265 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 AC078809.1-201ENST00000427601 140 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 IFNA20P-201ENST00000436840 528 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 AC244670.1-201ENST00000436879 112 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 MTCO2P3-201ENST00000442543 421 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 RPL23AP3-201ENST00000453844 468 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 RPL21P99-201ENST00000480369 423 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 AC091885.1-201ENST00000506658 268 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 AC105313.1-201ENST00000509121 353 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 AC004908.3-201ENST00000610248 625 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 MIR6845-201ENST00000613182 61 ntBASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.68□□□□□ -2.14
KLHDC3Q9BQ90 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC092268.1-201ENST00000342691 405 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 RNU4-56P-201ENST00000364700 142 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 RNU4-66P-201ENST00000365199 138 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 RNU6-38P-201ENST00000384085 107 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 MIR518A2-201ENST00000384966 87 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 SRIP3-201ENST00000413200 219 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 ARL5AP1-201ENST00000418991 388 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AL445685.2-201ENST00000422551 342 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC245102.2-201ENST00000448956 180 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 PRELID3BP1-201ENST00000457142 540 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 RNU6-333P-201ENST00000459117 107 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 SNRPGP7-201ENST00000469016 106 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 Y_RNA.654-201ENST00000497848 106 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 RPL23AP63-201ENST00000498752 471 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 Y_RNA.693-201ENST00000516641 110 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 RNU6-835P-201ENST00000516974 104 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 HSPE1P4-201ENST00000550617 308 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC007375.1-201ENST00000554513 578 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 MIR3935-201ENST00000583472 104 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC092747.3-201ENST00000603769 301 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC080013.6-201ENST00000606185 215 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC063943.3-201ENST00000615562 356 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 AC009487.4-201ENST00000624969 3585 ntBASIC1.67□□□□□ -2.14
KLHDC3Q9BQ90 ZNF702P-202ENST00000434269 1966 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms