Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL442163.3-201ENST00000554110 156 ntBASIC3.05□□□□□ -1.92
VRK1Q99986 MIR3923-201ENST00000579521 83 ntBASIC3.05□□□□□ -1.92
VRK1Q99986 AC124312.5-201ENST00000604451 268 ntBASIC3.05□□□□□ -1.92
VRK1Q99986 AC007179.3-201ENST00000604976 235 ntBASIC3.05□□□□□ -1.92
VRK1Q99986 AC004832.5-201ENST00000608677 401 ntBASIC3.05□□□□□ -1.92
VRK1Q99986 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.05□□□□□ -1.92
VRK1Q99986 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
VRK1Q99986 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VRK1Q99986 AC010329.5-201ENST00000623497 2174 ntBASIC3.05□□□□□ -1.92
VRK1Q99986 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VRK1Q99986 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
VRK1Q99986 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VRK1Q99986 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VRK1Q99986 ZNF72P-201ENST00000425869 1908 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VRK1Q99986 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VRK1Q99986 RNU6-486P-201ENST00000363116 107 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 Y_RNA.319-201ENST00000365138 92 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RNU6-1105P-201ENST00000384774 107 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RNA5SP213-201ENST00000391031 106 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RPL21P75-201ENST00000396599 483 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RPL21P28-201ENST00000401418 483 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AL590556.1-201ENST00000423231 483 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 EIF4EP4-201ENST00000424916 578 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 USP9YP16-201ENST00000430287 407 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RPS3AP12-201ENST00000443616 753 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.04□□□□□ -1.92
VRK1Q99986 MTCO3P8-201ENST00000453691 755 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 USP9YP23-201ENST00000455085 407 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RPS3P1-201ENST00000456781 192 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RPL21P39-201ENST00000463605 483 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RPL23AP67-201ENST00000465341 474 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AC087190.1-201ENST00000484462 480 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AC107032.1-201ENST00000485945 480 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AC132942.1-201ENST00000486753 483 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AC093591.1-201ENST00000491435 481 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RPL21P16-201ENST00000495531 483 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RNA5SP385-201ENST00000515947 110 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RNU6-1114P-201ENST00000516022 107 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RNU2-53P-201ENST00000516257 147 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 RNA5SP54-201ENST00000516951 92 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.04□□□□□ -1.92
VRK1Q99986 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.04□□□□□ -1.92
VRK1Q99986 AC103810.1-201ENST00000579873 453 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.04□□□□□ -1.92
VRK1Q99986 AL355297.3-201ENST00000604082 446 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AC096577.2-201ENST00000611455 153 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AL021879.1-201ENST00000611756 288 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 AP003355.3-201ENST00000623465 114 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VRK1Q99986 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.04□□□□□ -1.92
VRK1Q99986 AC000403.1-201ENST00000613696 3585 ntBASIC3.04□□□□□ -1.92
VRK1Q99986 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.03□□□□□ -1.92
VRK1Q99986 AC068647.1-201ENST00000489539 2265 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 AC093010.3-201ENST00000570269 15214 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.03□□□□□ -1.92
VRK1Q99986 Y_RNA.27-201ENST00000362540 103 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 Y_RNA.153-201ENST00000363615 91 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 RNA5SP42-201ENST00000364278 115 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 RNU4-50P-201ENST00000364361 141 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 SNORA68.1-201ENST00000364537 132 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 Y_RNA.551-201ENST00000384661 102 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 RNU6-541P-201ENST00000384709 110 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 U3.19-201ENST00000390893 196 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VRK1Q99986 AL356057.3-201ENST00000402607 340 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 HMGB3P2-201ENST00000411913 584 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 EIF1P2-201ENST00000428233 350 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 CYCSP4-201ENST00000429682 331 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 RPL23AP22-201ENST00000437556 453 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.03□□□□□ -1.92
VRK1Q99986 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.03□□□□□ -1.92
VRK1Q99986 snoU13.6-201ENST00000458785 104 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 U8.20-201ENST00000459445 131 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 AC007215.1-201ENST00000464893 276 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 AP000870.1-201ENST00000472927 406 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 Y_RNA.715-201ENST00000517082 110 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 RNU6-58P-201ENST00000517143 103 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 AP002770.2-201ENST00000543613 532 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.03□□□□□ -1.92
VRK1Q99986 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.03□□□□□ -1.92
VRK1Q99986 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.03□□□□□ -1.92
VRK1Q99986 RPS29P30-201ENST00000600975 111 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 AC008121.3-201ENST00000618726 433 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 MIR7975-201ENST00000619350 68 ntBASIC3.03□□□□□ -1.92
VRK1Q99986 AC026241.1-201ENST00000517873 2142 ntBASIC3.02□□□□□ -1.93
VRK1Q99986 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
VRK1Q99986 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VRK1Q99986 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VRK1Q99986 RNU6-450P-201ENST00000364654 107 ntBASIC3.02□□□□□ -1.93
VRK1Q99986 RNY3P4-201ENST00000384428 101 ntBASIC3.02□□□□□ -1.93
VRK1Q99986 RNVU1-14-201ENST00000384770 164 ntBASIC3.02□□□□□ -1.93
VRK1Q99986 MIR490-201ENST00000384865 128 ntBASIC3.02□□□□□ -1.93
VRK1Q99986 RNU6-159P-201ENST00000391080 106 ntBASIC3.02□□□□□ -1.93
VRK1Q99986 U3.39-201ENST00000408569 239 ntBASIC3.02□□□□□ -1.93
VRK1Q99986 RNA5SP201-201ENST00000410316 124 ntBASIC3.02□□□□□ -1.93
VRK1Q99986 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.02□□□□□ -1.93
VRK1Q99986 DBIP2-201ENST00000419076 262 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms