Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC073910.1-201ENST00000445047 438 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 AC020550.1-201ENST00000447385 163 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 FABP5P15-201ENST00000453566 214 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 AL353752.1-201ENST00000454946 260 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 RNA5SP67-201ENST00000516422 131 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 SUMO2P18-201ENST00000518873 252 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.07□□□□□ -2.42
ABCA3Q99758 AL136520.1-202ENST00000555494 763 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 MIR3678-201ENST00000578455 94 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 AC073410.2-201ENST00000603240 332 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 AC091946.2-201ENST00000606105 291 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.08□□□□□ -2.42
ABCA3Q99758 CALM2P3-201ENST00000400429 449 ntBASIC-0.08□□□□□ -2.42
ABCA3Q99758 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.08□□□□□ -2.42
ABCA3Q99758 BNIP3P6-201ENST00000549284 499 ntBASIC-0.08□□□□□ -2.42
ABCA3Q99758 AC093012.1-202ENST00000549403 582 ntBASIC-0.08□□□□□ -2.42
ABCA3Q99758 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.08□□□□□ -2.42
ABCA3Q99758 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.08□□□□□ -2.42
ABCA3Q99758 AC090617.9-201ENST00000623751 147 ntBASIC-0.08□□□□□ -2.42
ABCA3Q99758 CASC19-280ENST00000642102 1351 ntBASIC-0.08□□□□□ -2.42
ABCA3Q99758 AC060773.1-201ENST00000421698 310 ntBASIC-0.09□□□□□ -2.42
ABCA3Q99758 AC005094.1-201ENST00000440420 368 ntBASIC-0.09□□□□□ -2.42
ABCA3Q99758 snoU13.14-201ENST00000459372 104 ntBASIC-0.09□□□□□ -2.42
ABCA3Q99758 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.09□□□□□ -2.42
ABCA3Q99758 RNU6-143P-201ENST00000516942 93 ntBASIC-0.09□□□□□ -2.42
ABCA3Q99758 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.09□□□□□ -2.42
ABCA3Q99758 AC022022.2-201ENST00000602989 360 ntBASIC-0.09□□□□□ -2.42
ABCA3Q99758 AL513534.2-201ENST00000603836 250 ntBASIC-0.09□□□□□ -2.42
ABCA3Q99758 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.09□□□□□ -2.42
ABCA3Q99758 MTND4P21-201ENST00000453886 1357 ntBASIC-0.09□□□□□ -2.42
ABCA3Q99758 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.09□□□□□ -2.42
ABCA3Q99758 AL133264.1-201ENST00000407157 562 ntBASIC-0.1□□□□□ -2.42
ABCA3Q99758 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.1□□□□□ -2.42
ABCA3Q99758 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.1□□□□□ -2.42
ABCA3Q99758 HMGN2P34-201ENST00000437647 269 ntBASIC-0.1□□□□□ -2.42
ABCA3Q99758 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.1□□□□□ -2.42
ABCA3Q99758 RNA5SP135-201ENST00000517019 125 ntBASIC-0.1□□□□□ -2.42
ABCA3Q99758 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.1□□□□□ -2.42
ABCA3Q99758 AC098483.2-201ENST00000603158 454 ntBASIC-0.1□□□□□ -2.42
ABCA3Q99758 MIR3976-201ENST00000606807 139 ntBASIC-0.1□□□□□ -2.42
ABCA3Q99758 OR5AK4P-201ENST00000635912 903 ntBASIC-0.1□□□□□ -2.42
ABCA3Q99758 RNU6-28P-201ENST00000362378 107 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 RNU6-48P-201ENST00000384161 107 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 MIR186-201ENST00000384988 86 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 MIR548B-201ENST00000385247 97 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 MTCO2P31-201ENST00000402702 684 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 ELOCP9-201ENST00000418624 239 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 AL590556.1-201ENST00000423231 483 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 RPL39P6-201ENST00000448289 150 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
ABCA3Q99758 AL031281.1-201ENST00000604049 488 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 uc_338.6-201ENST00000613544 171 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 SNORD3E-202ENST00000627253 216 ntBASIC-0.1□□□□□ -2.43
ABCA3Q99758 RNU6-655P-201ENST00000362858 107 ntBASIC-0.11□□□□□ -2.43
ABCA3Q99758 SNORA40C-201ENST00000391285 128 ntBASIC-0.11□□□□□ -2.43
ABCA3Q99758 RNA5SP390-201ENST00000410191 113 ntBASIC-0.11□□□□□ -2.43
ABCA3Q99758 MTCO1P21-201ENST00000416634 589 ntBASIC-0.11□□□□□ -2.43
ABCA3Q99758 AC244098.3-201ENST00000424803 96 ntBASIC-0.11□□□□□ -2.43
ABCA3Q99758 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.11□□□□□ -2.43
ABCA3Q99758 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.11□□□□□ -2.43
ABCA3Q99758 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.11□□□□□ -2.43
ABCA3Q99758 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.11□□□□□ -2.43
ABCA3Q99758 AC093809.1-201ENST00000509155 340 ntBASIC-0.11□□□□□ -2.43
ABCA3Q99758 SNORA68.3-201ENST00000515906 83 ntBASIC-0.11□□□□□ -2.43
ABCA3Q99758 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.11□□□□□ -2.43
ABCA3Q99758 U8.7-201ENST00000364940 136 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 RNU6-359P-201ENST00000365466 108 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 RNU6-657P-201ENST00000383904 107 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA3Q99758 RAD1P2-201ENST00000446414 663 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 MTCO3P28-201ENST00000513351 515 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 AC026371.1-201ENST00000551867 419 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA3Q99758 AL356157.2-201ENST00000605122 111 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 AL078595.3-201ENST00000623815 1166 ntBASIC-0.12□□□□□ -2.43
ABCA3Q99758 MIR103A1-201ENST00000362165 78 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 RNA5SP214-201ENST00000363378 118 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
ABCA3Q99758 AF228730.1-201ENST00000397972 663 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 ARL5AP1-201ENST00000418991 388 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA3Q99758 MTCO3P29-201ENST00000432119 779 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 AC002486.1-201ENST00000435098 391 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 AC026410.2-201ENST00000460281 156 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA3Q99758 AL161798.1-201ENST00000604630 131 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 AL159153.1-201ENST00000619688 317 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 SNORD118-201ENST00000363593 134 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 RNU6-438P-201ENST00000365561 103 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 RNU6-163P-201ENST00000384396 106 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA3Q99758 MTND4P20-201ENST00000424125 869 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 AC010153.1-201ENST00000432862 727 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA3Q99758 SNORD57-201ENST00000448188 72 ntBASIC-0.13□□□□□ -2.43
ABCA3Q99758 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms