Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AP000346.3-201ENST00000622821 210 ntBASIC2.13□□□□□ -2.07
LITAFQ99732 AC110079.1-202ENST00000635213 138 ntBASIC2.13□□□□□ -2.07
LITAFQ99732 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.13□□□□□ -2.07
LITAFQ99732 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.13□□□□□ -2.07
LITAFQ99732 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.13□□□□□ -2.07
LITAFQ99732 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.12□□□□□ -2.07
LITAFQ99732 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LITAFQ99732 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.12□□□□□ -2.07
LITAFQ99732 OR56A5-201ENST00000340110 738 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LITAFQ99732 RNA5SP361-201ENST00000362686 118 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 Y_RNA.439-201ENST00000384119 94 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 RNU6-281P-201ENST00000384212 103 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 Y_RNA.461-201ENST00000384263 103 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 MT-TW-201ENST00000387382 68 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 MT-TG-201ENST00000387429 68 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 RNU6-121P-201ENST00000410525 99 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 AL139281.1-201ENST00000422120 335 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 AIMP1P2-201ENST00000425294 312 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 AL445305.1-201ENST00000432577 575 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 RPS29P6-201ENST00000438196 145 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.12□□□□□ -2.07
LITAFQ99732 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.12□□□□□ -2.07
LITAFQ99732 RPL36AP48-201ENST00000485521 314 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.12□□□□□ -2.07
LITAFQ99732 AC025465.3-201ENST00000510570 311 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 SNORA31.6-201ENST00000516241 130 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 Y_RNA.713-201ENST00000517013 96 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 AP003733.2-201ENST00000529409 171 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
LITAFQ99732 PARP1P2-201ENST00000556806 195 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 CYP4A27P-201ENST00000567218 190 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 MIR5695-201ENST00000579717 85 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 MIR4659A-201ENST00000580269 81 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
LITAFQ99732 AL034555.1-201ENST00000604816 211 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 AC062037.2-201ENST00000610137 73 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.12□□□□□ -2.07
LITAFQ99732 AC019176.2-201ENST00000611579 315 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.12□□□□□ -2.07
LITAFQ99732 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
LITAFQ99732 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.12□□□□□ -2.07
LITAFQ99732 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LITAFQ99732 AL109809.4-201ENST00000603520 2185 ntBASIC2.12□□□□□ -2.07
LITAFQ99732 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LITAFQ99732 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.11□□□□□ -2.07
LITAFQ99732 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LITAFQ99732 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LITAFQ99732 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.11□□□□□ -2.07
LITAFQ99732 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.11□□□□□ -2.07
LITAFQ99732 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
LITAFQ99732 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LITAFQ99732 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
LITAFQ99732 RNU6-799P-201ENST00000363567 107 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 Y_RNA.188-201ENST00000363952 111 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 RNU4-56P-201ENST00000364700 142 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 Y_RNA.376-201ENST00000365638 108 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 U8.9-201ENST00000365667 134 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 MIR186-201ENST00000384988 86 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 RNU1-101P-201ENST00000391171 127 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 U3.26-201ENST00000391236 204 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 MIR1302-6-201ENST00000408466 90 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 SNORD88.1-201ENST00000408684 91 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.11□□□□□ -2.07
LITAFQ99732 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.11□□□□□ -2.07
LITAFQ99732 RPL21P38-201ENST00000418090 167 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 CBX3P6-201ENST00000430257 527 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.11□□□□□ -2.07
LITAFQ99732 FCF1P8-201ENST00000510322 597 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 RNU6-408P-201ENST00000515910 100 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 SNORA31.9-201ENST00000516429 84 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 RNA5SP54-201ENST00000516951 92 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.11□□□□□ -2.07
LITAFQ99732 AC093023.1-201ENST00000547375 507 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 AC079598.5-201ENST00000547460 117 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.11□□□□□ -2.07
LITAFQ99732 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.11□□□□□ -2.07
LITAFQ99732 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.11□□□□□ -2.07
LITAFQ99732 MIR3923-201ENST00000579521 83 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 MIR4310-201ENST00000582950 57 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.11□□□□□ -2.07
LITAFQ99732 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.11□□□□□ -2.07
LITAFQ99732 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.11□□□□□ -2.07
LITAFQ99732 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.11□□□□□ -2.07
LITAFQ99732 AC073410.2-201ENST00000603240 332 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 Y_RNA.772-201ENST00000606692 102 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 AC005520.5-201ENST00000613926 164 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 AC011476.5-201ENST00000615594 130 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 CR392039.5-201ENST00000623201 510 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 AC002064.3-201ENST00000623448 346 ntBASIC2.11□□□□□ -2.07
LITAFQ99732 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.1□□□□□ -2.07
LITAFQ99732 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.1□□□□□ -2.07
LITAFQ99732 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LITAFQ99732 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
LITAFQ99732 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LITAFQ99732 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LITAFQ99732 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms