Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 U3.4-201ENST00000363352 213 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 RNU6-142P-201ENST00000384019 107 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 RNU6-434P-201ENST00000384376 107 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 RPS29P13-201ENST00000402041 169 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AL357139.1-201ENST00000407792 426 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AL590135.1-201ENST00000422215 156 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC019205.3-201ENST00000424573 156 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC244670.1-201ENST00000436879 112 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC244505.5-201ENST00000443639 207 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC016700.2-201ENST00000446011 156 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 HMGN2P18-201ENST00000450680 270 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC112492.4-201ENST00000456549 352 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 RNU6-333P-201ENST00000459117 107 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC079382.1-201ENST00000493346 557 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC015911.1-201ENST00000495111 156 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AP002963.1-201ENST00000530590 184 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AGGF1P4-201ENST00000568249 801 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 MIR3913-1-201ENST00000577744 102 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 MIR3136-201ENST00000583498 78 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 Z94722.1-201ENST00000604328 474 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 RMST_6.1-201ENST00000611980 203 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 uc_338.11-201ENST00000619132 160 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC130454.1-201ENST00000622948 401 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 AC009161.2-201ENST00000624626 138 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 MIR126-201ENST00000362291 85 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 Y_RNA.140-201ENST00000363474 103 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 SNORD32A-201ENST00000364805 84 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 Y_RNA.332-201ENST00000365271 113 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 Y_RNA.480-201ENST00000384364 102 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 PIGFP2-201ENST00000421400 651 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.59□□□□□ -2.15
RPRD1AQ96P16 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.59□□□□□ -2.15
RPRD1AQ96P16 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.59□□□□□ -2.15
RPRD1AQ96P16 AC022364.2-201ENST00000457963 554 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.59□□□□□ -2.15
RPRD1AQ96P16 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.59□□□□□ -2.15
RPRD1AQ96P16 MIR4303-201ENST00000581299 66 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 AC012507.3-201ENST00000603556 477 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 AC091805.2-201ENST00000603848 235 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 AC010900.2-201ENST00000604508 210 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 AC022513.1-201ENST00000624512 117 ntBASIC1.59□□□□□ -2.15
RPRD1AQ96P16 LINC02555-201ENST00000563933 1951 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 RNU1-42P-201ENST00000364033 160 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 RNU6-266P-201ENST00000364225 107 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 RNU6-606P-201ENST00000384721 111 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 MIR30A-201ENST00000385092 71 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 SNORA67.6-201ENST00000391093 99 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 RNU2-9P-201ENST00000410194 145 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 RN7SKP51-201ENST00000410781 304 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.58□□□□□ -2.16
RPRD1AQ96P16 SNAP23P1-201ENST00000433229 246 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AL031274.1-201ENST00000450334 232 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AMD1P1-201ENST00000457220 922 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.58□□□□□ -2.16
RPRD1AQ96P16 SCARNA18-201ENST00000459004 134 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 MTND3P7-201ENST00000474435 343 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.58□□□□□ -2.16
RPRD1AQ96P16 FAM206BP-201ENST00000510179 541 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 RNA5SP458-201ENST00000516188 119 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 Y_RNA.717-201ENST00000517106 92 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AC087441.2-201ENST00000529141 262 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 MTCO3P23-201ENST00000561363 289 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AL645939.4-201ENST00000604495 135 ntBASIC1.58□□□□□ -2.16
RPRD1AQ96P16 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.58□□□□□ -2.16
RPRD1AQ96P16 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 RNU6-60P-201ENST00000364792 103 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 RNU6-827P-201ENST00000365553 106 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 RNU6-26P-201ENST00000383985 107 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 RNU6-439P-201ENST00000384188 106 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 U8.10-201ENST00000384260 133 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 MTCYBP2-201ENST00000407745 171 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 RNA5SP201-201ENST00000410316 124 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 RN7SKP61-201ENST00000410642 295 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 C1DP4-201ENST00000455429 424 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC130509.1-201ENST00000464158 433 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 GMFBP1-201ENST00000467831 427 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms