Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC138Q96M89 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC138Q96M89 RNU5B-2P-201ENST00000363036 113 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 RNU6-867P-201ENST00000364956 107 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 RNU6-842P-201ENST00000384269 107 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 RNU6-1072P-201ENST00000384703 107 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 RNU6-443P-201ENST00000384780 107 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 SNORA48.5-201ENST00000391143 135 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 MTCYBP2-201ENST00000407745 171 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 RNA5SP494-201ENST00000410653 129 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 HMGN2P35-201ENST00000412164 270 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC138Q96M89 AC145146.1-201ENST00000496370 254 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC138Q96M89 AC005741.1-201ENST00000511094 432 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 Y_RNA.670-201ENST00000516255 105 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC138Q96M89 CBX3P7-201ENST00000532876 502 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC138Q96M89 RPS3AP23-202ENST00000574601 686 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC138Q96M89 LARP7P1-201ENST00000605576 316 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 AP000654.2-201ENST00000605633 586 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 AC009229.3-201ENST00000608056 282 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 AL162274.2-201ENST00000614406 332 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC138Q96M89 AC000403.1-201ENST00000613696 3585 ntBASIC2.88□□□□□ -1.95
CCDC138Q96M89 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC138Q96M89 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC138Q96M89 Y_RNA.2-201ENST00000362330 96 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 SNORA38-201ENST00000363946 132 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 Y_RNA.356-201ENST00000365475 113 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 Y_RNA.384-201ENST00000383909 102 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 MIR561-201ENST00000385216 97 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 AL138885.1-201ENST00000405921 675 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC138Q96M89 RNU4-14P-201ENST00000410858 122 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC138Q96M89 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC138Q96M89 FO393415.2-201ENST00000480085 343 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC138Q96M89 RNU6-277P-201ENST00000516272 106 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 MIR5696-201ENST00000578474 85 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC138Q96M89 HMGB1P24-202ENST00000615653 685 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 U4atac.1-201ENST00000618345 95 ntBASIC2.87□□□□□ -1.95
CCDC138Q96M89 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC138Q96M89 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC138Q96M89 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC138Q96M89 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC138Q96M89 SNORA9.2-201ENST00000365361 133 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 Y_RNA.387-201ENST00000383918 102 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 Y_RNA.473-201ENST00000384333 102 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 RNU6-851P-201ENST00000384565 107 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 Y_RNA.529-201ENST00000384586 119 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 RNA5SP201-201ENST00000410316 124 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 Y_RNA.597-201ENST00000410463 100 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC138Q96M89 AC022018.1-201ENST00000430685 241 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC138Q96M89 RPL23AP75-201ENST00000491601 451 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC138Q96M89 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.86□□□□□ -1.95
CCDC138Q96M89 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC138Q96M89 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC138Q96M89 MIR4325-201ENST00000583049 90 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 MIR5690-201ENST00000583739 73 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 PCGEM1.1-201ENST00000613431 131 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 AC005520.5-201ENST00000613926 164 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 AC137590.2-201ENST00000619709 240 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 AC098657.3-201ENST00000620434 263 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 AL359757.2-201ENST00000624309 274 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 MIR1302-1-201ENST00000637932 143 ntBASIC2.86□□□□□ -1.95
CCDC138Q96M89 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CCDC138Q96M89 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
CCDC138Q96M89 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC138Q96M89 RNU6-1159P-201ENST00000362933 107 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 RNU5E-4P-201ENST00000364931 120 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 MT-TD-201ENST00000387419 68 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 SNORA75.4-201ENST00000391278 119 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 AL139095.1-201ENST00000404326 391 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 Y_RNA.604-201ENST00000410574 102 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 RNU6-370P-201ENST00000411008 104 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 CBX3P6-201ENST00000430257 527 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 S100A11P2-201ENST00000467589 312 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 RNU6-559P-201ENST00000516151 98 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CCDC138Q96M89 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC138Q96M89 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CCDC138Q96M89 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 KPNA2P1-201ENST00000458289 1591 ntBASIC2.85□□□□□ -1.95
CCDC138Q96M89 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC138Q96M89 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC138Q96M89 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC138Q96M89 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
CCDC138Q96M89 U3.9-201ENST00000363823 204 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms