Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNX27Q96L92 RNU4-79P-201ENST00000362764 141 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 RNU1-35P-201ENST00000362782 153 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 Y_RNA.473-201ENST00000384333 102 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 RNU6-1304P-201ENST00000411374 106 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 ATG3P1-201ENST00000419507 911 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX27Q96L92 DAP3P1-201ENST00000441522 278 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX27Q96L92 Y_RNA.632-201ENST00000459189 102 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 RPL30P12-201ENST00000474666 353 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 SMURF2P1-201ENST00000514992 481 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 CKS1BP7-201ENST00000522230 235 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX27Q96L92 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX27Q96L92 AC090897.2-201ENST00000581715 130 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 RPS15AP11-201ENST00000594193 385 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 AP001836.1-201ENST00000604675 523 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 AC018462.2-201ENST00000605375 395 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 AC096772.1-201ENST00000609146 564 ntBASIC3.05□□□□□ -1.92
SNX27Q96L92 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNX27Q96L92 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX27Q96L92 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SNX27Q96L92 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX27Q96L92 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX27Q96L92 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SNX27Q96L92 RNU6-227P-201ENST00000362865 103 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RNU6-1059P-201ENST00000363752 98 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RNU6-1297P-201ENST00000384415 104 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 Y_RNA.509-201ENST00000384506 99 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RNU6-1050P-201ENST00000410388 107 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RNU2-52P-201ENST00000410680 190 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RPL19P1-201ENST00000411635 428 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX27Q96L92 AL133396.1-201ENST00000432048 687 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RPL39P29-201ENST00000447779 157 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 GSTA11P-201ENST00000452866 669 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 SNORD5.1-201ENST00000458800 75 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 SNRPGP7-201ENST00000469016 106 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RPL36AP48-201ENST00000485521 314 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 AC026782.1-201ENST00000512952 449 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX27Q96L92 ACA59.1-201ENST00000515966 143 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 Y_RNA.708-201ENST00000516950 96 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RNA5SP490-201ENST00000517141 136 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX27Q96L92 GLYCAM1-201ENST00000546596 285 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 AC105137.2-201ENST00000569073 466 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 SNORA4-201ENST00000584302 138 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RPL23AP88-201ENST00000605759 454 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 MIR8076-201ENST00000611401 83 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 PISRT1.1-201ENST00000616930 107 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 MTND4LP32-201ENST00000636111 270 ntBASIC3.04□□□□□ -1.92
SNX27Q96L92 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SNX27Q96L92 Y_RNA.224-201ENST00000364308 111 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 U8.8-201ENST00000365399 135 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 RNU6-1083P-201ENST00000384022 107 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SNX27Q96L92 BTF3L4P2-201ENST00000392798 346 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 AL512633.1-201ENST00000399931 655 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 Y_RNA.594-201ENST00000410373 140 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 AP000275.1-201ENST00000411943 390 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 RPL23AP58-201ENST00000440453 469 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 AL031659.1-201ENST00000447075 539 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 AC112771.1-201ENST00000463581 102 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 RPS29P27-201ENST00000463711 170 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX27Q96L92 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX27Q96L92 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX27Q96L92 APOOP3-201ENST00000536787 586 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX27Q96L92 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX27Q96L92 MIR5690-201ENST00000583739 73 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX27Q96L92 AC009229.3-201ENST00000608056 282 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.03□□□□□ -1.92
SNX27Q96L92 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX27Q96L92 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SNX27Q96L92 AC002543.1-201ENST00000299783 1954 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 SNORD114-19-201ENST00000363072 75 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 AL138827.1-201ENST00000402666 306 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 RNA5SP492-201ENST00000411330 114 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 AC236972.2-201ENST00000434979 310 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX27Q96L92 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX27Q96L92 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX27Q96L92 SEM1P1-201ENST00000506694 209 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 SNORA25.11-201ENST00000515935 105 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 SCARNA11.3-201ENST00000517276 130 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX27Q96L92 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SNX27Q96L92 MIR4765-201ENST00000585007 77 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 AC011494.1-201ENST00000596454 237 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 AP000654.2-201ENST00000605633 586 ntBASIC3.02□□□□□ -1.93
SNX27Q96L92 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms