Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.26□□□□□ -2.45
SPG11Q96JI7 RNU7-21P-201ENST00000459430 62 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC024405.2-202ENST00000532731 184 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC025423.5-201ENST00000550230 219 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC138869.1-201ENST00000568623 124 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 MIR4324-201ENST00000584846 72 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC120349.3-201ENST00000624377 529 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 MIR103A2-201ENST00000362154 78 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 RNU6-23P-201ENST00000363283 107 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 SMIM11P1-201ENST00000369586 178 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AL049545.1-201ENST00000401856 572 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 USP9YP19-201ENST00000412165 485 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 USP9YP13-201ENST00000417797 480 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 C8orf59P1-201ENST00000429930 303 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 RAD1P2-201ENST00000446414 663 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC091860.1-201ENST00000505723 432 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC113420.1-201ENST00000507903 571 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 RNA5SP180-201ENST00000516181 101 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC069113.3-201ENST00000521019 150 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AL022067.1-201ENST00000602426 454 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC107304.1-201ENST00000604229 296 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC121334.2-201ENST00000605387 271 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC017037.3-201ENST00000625016 472 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.27□□□□□ -2.45
SPG11Q96JI7 SNORD114-11-201ENST00000363738 75 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 RNA5SP275-201ENST00000363936 118 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 RNA5SP300-201ENST00000391197 107 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 RNU6-370P-201ENST00000411008 104 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPG11Q96JI7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPG11Q96JI7 BUD31P2-201ENST00000449374 300 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AC024589.1-201ENST00000512207 263 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.27□□□□□ -2.45
SPG11Q96JI7 RPL23AP91-201ENST00000569211 455 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 MIR3976-201ENST00000606807 139 ntBASIC-0.27□□□□□ -2.45
SPG11Q96JI7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 RNU4-79P-201ENST00000362764 141 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 RNU6-756P-201ENST00000383997 107 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 MIR610-201ENST00000385139 96 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC109327.2-201ENST00000448339 378 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AL049870.4-201ENST00000555741 486 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AP005212.4-201ENST00000614206 710 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AL163051.2-201ENST00000618976 735 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 RNY4P28-201ENST00000365281 93 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 RNU6-296P-201ENST00000384608 107 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 MIR145-201ENST00000384967 88 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 MIR496-201ENST00000385226 102 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AL133475.1-201ENST00000404414 305 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC011233.1-201ENST00000422812 283 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC104332.1-201ENST00000440471 797 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AL353752.1-201ENST00000454946 260 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 HMGN2P26-201ENST00000463169 339 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 MTND1P3-201ENST00000484956 952 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC023194.1-201ENST00000493084 308 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AC022483.1-201ENST00000514020 567 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 MIR3169-201ENST00000578032 83 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AL353997.4-201ENST00000586196 166 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AP002906.1-201ENST00000603405 233 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AF129408.1-201ENST00000608767 431 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 AL133445.2-201ENST00000611191 527 ntBASIC-0.28□□□□□ -2.45
SPG11Q96JI7 MTND4P5-201ENST00000435821 1374 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 MIR643-201ENST00000385267 97 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 MIR760-201ENST00000390220 80 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 MIR548H2-201ENST00000408874 88 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 RNA5SP111-201ENST00000411386 101 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AC016925.1-201ENST00000458303 298 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AC022868.1-201ENST00000517767 391 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 MIR3165-201ENST00000579874 75 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AC005021.1-201ENST00000608730 355 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 MTND2P41-201ENST00000637599 773 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.29□□□□□ -2.46
SPG11Q96JI7 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AL590632.1-201ENST00000424289 371 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.29□□□□□ -2.46
SPG11Q96JI7 RPL17P35-201ENST00000432217 549 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 GTF2IP3-201ENST00000433887 494 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 MTND1P28-201ENST00000435623 950 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AC002429.1-201ENST00000437672 148 ntBASIC-0.29□□□□□ -2.46
SPG11Q96JI7 AC023512.1-201ENST00000444513 499 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms