Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 RNU6-567P-201ENST00000516746 107 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 MIR5571-201ENST00000577998 113 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AC010928.2-201ENST00000588017 287 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 Z98751.3-201ENST00000604447 521 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 ZNF72P-201ENST00000425869 1908 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AL035425.3-201ENST00000564206 4996 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AC091564.4-201ENST00000533934 2194 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 RNU6-1010P-201ENST00000362757 107 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 Y_RNA.358-201ENST00000365491 99 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 SNORA54-201ENST00000384281 123 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 SNORA46-201ENST00000384762 135 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 RNU6-1105P-201ENST00000384774 107 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 RN7SKP220-201ENST00000410611 288 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 CYCSP48-201ENST00000417124 323 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 DPH3P2-201ENST00000422618 250 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 TOMM22P6-201ENST00000465035 409 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AC006445.1-201ENST00000491925 405 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 RPL22P13-201ENST00000493291 347 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 ANXA2P1-201ENST00000505539 926 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 RNU6-1198P-201ENST00000516904 67 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AC040926.1-201ENST00000530195 238 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AL117187.1-201ENST00000555482 181 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AC008269.2-201ENST00000561915 1105 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AC113195.1-201ENST00000579952 141 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 MIR4325-201ENST00000583049 90 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 MIR3136-201ENST00000583498 78 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AL133393.1-201ENST00000603277 287 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AP000942.4-201ENST00000604811 241 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AL138963.2-201ENST00000605137 226 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 AC005000.2-201ENST00000605468 310 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 SNORA43.4-201ENST00000629559 138 ntBASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.86□□□□□ -1.95
CTHRC1Q96CG8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 MIR148B-201ENST00000362252 99 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RNU6-212P-201ENST00000362642 104 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RNU5B-2P-201ENST00000363036 113 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 Y_RNA.106-201ENST00000363189 100 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RNU6-1309P-201ENST00000363305 108 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RNU4-50P-201ENST00000364361 141 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RNU6-17P-201ENST00000384245 107 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RNU6-18P-201ENST00000384527 107 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RNU6-541P-201ENST00000384709 110 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 SNORD67-201ENST00000390833 111 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AL590135.1-201ENST00000422215 156 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC019205.3-201ENST00000424573 156 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AL358075.3-201ENST00000426289 226 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC016700.2-201ENST00000446011 156 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RPL36AP48-201ENST00000485521 314 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RN7SL20P-201ENST00000488827 297 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AIG1P1-201ENST00000503376 148 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 MIR4506-201ENST00000584693 77 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC110079.1-202ENST00000635213 138 ntBASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CTHRC1Q96CG8 AC103988.1-201ENST00000566382 2177 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 Y_RNA.133-201ENST00000363428 110 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 RNU6-450P-201ENST00000364654 107 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 SNORA63.7-201ENST00000365579 123 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 Y_RNA.557-201ENST00000384680 107 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 SNORA48.2-201ENST00000390926 124 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 SNORA48.5-201ENST00000391143 135 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 MIR1252-201ENST00000408861 65 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 RNU6-1140P-201ENST00000410517 106 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AC012306.1-201ENST00000423267 114 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms