Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 RNU2-29P-201ENST00000410423 189 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC123900.1-201ENST00000420390 96 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 MTCO2P34-201ENST00000421994 607 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC47Q96A33 HMGB1P18-201ENST00000438801 619 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC47Q96A33 MTND1P27-201ENST00000451117 902 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC47Q96A33 RNU1-131P-201ENST00000458943 161 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 MTND3P7-201ENST00000474435 343 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC47Q96A33 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC010486.2-201ENST00000505572 483 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC47Q96A33 ATP5EP1-201ENST00000510257 156 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 SNORA31.17-201ENST00000516953 127 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC47Q96A33 MTCO3P23-201ENST00000561363 289 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC078795.3-201ENST00000602913 472 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC025449.1-201ENST00000603896 529 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AL356157.2-201ENST00000605122 111 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 AC072046.2-201ENST00000618366 268 ntBASIC1.84□□□□□ -2.11
CCDC47Q96A33 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC47Q96A33 AP000648.3-201ENST00000623539 4507 ntBASIC1.84□□□□□ -2.12
CCDC47Q96A33 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC47Q96A33 AC092268.1-201ENST00000342691 405 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 U8.13-201ENST00000390842 128 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 RNA5SP201-201ENST00000410316 124 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 RN7SKP101-201ENST00000411376 320 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC47Q96A33 AL358934.1-201ENST00000432346 324 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 SNRPEP8-201ENST00000442866 260 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 YWHAEP4-201ENST00000505390 198 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC47Q96A33 AC008536.2-201ENST00000607284 349 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
CCDC47Q96A33 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC47Q96A33 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC47Q96A33 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC47Q96A33 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CCDC47Q96A33 RNU6-438P-201ENST00000365561 103 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 AL133396.1-201ENST00000432048 687 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 AC132479.1-201ENST00000449160 144 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 SNRPFP3-201ENST00000457792 225 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 AC016632.1-201ENST00000503994 196 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 AC096745.1-201ENST00000509945 370 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 AC069113.1-201ENST00000517763 267 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC47Q96A33 SUB1P4-201ENST00000566062 339 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC47Q96A33 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC47Q96A33 AC040904.1-201ENST00000590850 223 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC47Q96A33 AC013412.1-201ENST00000610687 192 ntBASIC1.82□□□□□ -2.12
CCDC47Q96A33 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.81□□□□□ -2.12
CCDC47Q96A33 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC47Q96A33 U3.9-201ENST00000363823 204 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 RNA5SP363-201ENST00000365072 115 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 Y_RNA.504-201ENST00000384481 104 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CCDC47Q96A33 SNORA26.3-201ENST00000391119 136 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 RNU2-41P-201ENST00000410991 178 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 AC139712.2-201ENST00000424302 339 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 RPL23AP95-201ENST00000426806 265 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 MTCO2P11-201ENST00000431069 680 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC47Q96A33 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC47Q96A33 AC091874.1-201ENST00000511402 339 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 AC105417.1-201ENST00000514691 285 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 SNORA25.15-201ENST00000516487 89 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 RN7SKP219-201ENST00000516825 296 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC47Q96A33 AC068790.2-201ENST00000602601 557 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 MIR6845-201ENST00000613182 61 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 PCGEM1.1-201ENST00000613431 131 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 MTND4P14-201ENST00000435799 1354 ntBASIC1.81□□□□□ -2.12
CCDC47Q96A33 RNU6-552P-201ENST00000362869 119 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 Y_RNA.399-201ENST00000383955 105 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 RNU6-903P-201ENST00000391270 109 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 AL031667.1-201ENST00000440222 725 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC47Q96A33 RNU1-98P-201ENST00000458992 160 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 RNU7-167P-201ENST00000459160 62 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 AC097473.1-201ENST00000508142 408 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC47Q96A33 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC47Q96A33 AL137161.1-201ENST00000532231 390 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 AK6P1-201ENST00000540219 478 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC47Q96A33 AC145350.1-201ENST00000567426 208 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 MIR5094-201ENST00000578766 85 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC47Q96A33 AC011494.1-201ENST00000596454 237 ntBASIC1.8□□□□□ -2.12
CCDC47Q96A33 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC47Q96A33 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms