Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 RNU6-261P-201ENST00000459506 102 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 MTCYBP18-201ENST00000501056 747 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AC009646.1-201ENST00000510455 318 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AL359880.1-201ENST00000621879 266 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 MTND4P27-201ENST00000450813 1354 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-623P-201ENST00000363143 105 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-282P-201ENST00000365357 103 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-434P-201ENST00000384376 107 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1179P-201ENST00000384667 107 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 CALM2P3-201ENST00000400429 449 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU2-29P-201ENST00000410423 189 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1068P-201ENST00000410958 103 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 HMGN1P33-201ENST00000432945 451 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC073415.1-201ENST00000449240 153 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RBBP4P6-201ENST00000508098 202 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU1-86P-201ENST00000516108 154 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 SNORA31.6-201ENST00000516241 130 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU1-107P-201ENST00000516617 154 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1178P-201ENST00000516674 107 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 ACA59.2-201ENST00000517061 156 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AP003033.1-201ENST00000527244 415 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AL391813.1-201ENST00000603098 260 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 MIR6788-201ENST00000618842 66 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC068137.3-201ENST00000639191 341 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-78P-201ENST00000362897 107 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-190P-201ENST00000384154 102 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-72P-201ENST00000384285 79 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1328P-201ENST00000410938 106 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 MTCO1P21-201ENST00000416634 589 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 MTND3P21-201ENST00000433774 331 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC092001.1-201ENST00000453012 261 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 C1DP4-201ENST00000455429 424 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 GMFBP1-201ENST00000467831 427 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 MTCO3P38-201ENST00000468910 766 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.654-201ENST00000497848 106 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 SNORA25.17-201ENST00000517184 124 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC136619.2-201ENST00000563361 631 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC093249.1-201ENST00000567049 203 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC073539.2-201ENST00000597113 165 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC068790.6-201ENST00000602558 258 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC087045.1-201ENST00000605856 382 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AC012557.2-201ENST00000605919 418 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 AL449363.1-201ENST00000617815 186 ntBASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SHROOM3Q8TF72 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 RNU6-371P-201ENST00000364283 108 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.481-201ENST00000384373 102 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 RNU6-393P-201ENST00000384475 107 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 MTCO3P41-201ENST00000414801 328 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 OR51A5P-201ENST00000415429 942 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AL353621.1-201ENST00000418219 243 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC022364.2-201ENST00000457963 554 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 RNU6-189P-201ENST00000516120 101 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 SCARNA11.3-201ENST00000517276 130 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AP005597.4-201ENST00000526762 229 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 HMGB1P33-201ENST00000563485 527 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC023824.2-201ENST00000566185 400 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 RNU6-91P-201ENST00000607774 107 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AL133216.2-202ENST00000634512 349 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 ZNF680P1-201ENST00000436625 1469 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 RNU1-22P-201ENST00000363334 158 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 SNORD116-4-201ENST00000384733 96 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms