Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AL033519.2-201ENST00000403958 392 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 RNA5SP184-201ENST00000411071 108 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 Y_RNA.793-201ENST00000411222 111 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 EIF1AXP1-201ENST00000419267 435 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AC104332.1-201ENST00000440471 797 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AC243964.1-201ENST00000441814 261 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AL136097.1-201ENST00000456945 913 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AC021205.2-201ENST00000480069 347 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 RNU6-789P-201ENST00000517105 102 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 MIR4643-201ENST00000577473 78 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AC104984.5-201ENST00000586878 94 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 U2.14-201ENST00000615943 113 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 IGHVIII-44-202ENST00000636235 289 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RNU6-600P-201ENST00000362524 99 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RNU4-90P-201ENST00000362773 141 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RNU6-290P-201ENST00000365212 101 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RNU6-886P-201ENST00000384319 105 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 MIR518D-201ENST00000385014 87 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 AC002075.2-201ENST00000425207 252 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RPS15AP7-201ENST00000439294 405 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 AC098831.1-201ENST00000440661 216 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 MTATP6P7-201ENST00000453315 681 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 AC087477.1-201ENST00000465747 340 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RPL23AP14-201ENST00000468281 468 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 AP000870.1-201ENST00000472927 406 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 AF186996.7-201ENST00000492781 209 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 AC091874.1-201ENST00000511402 339 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RNU6-406P-201ENST00000516470 107 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 ZNF192P1-203ENST00000565888 810 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LINC00116Q8NCU8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 RNU6-942P-201ENST00000363002 107 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 RNA5SP322-201ENST00000363617 119 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 Y_RNA.199-201ENST00000364014 102 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 SNORD115-32-201ENST00000364079 82 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 RNU6-318P-201ENST00000384283 103 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 SNORD116-20-201ENST00000384529 92 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 RNU6-541P-201ENST00000384709 110 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 HMGN2P30-201ENST00000423237 256 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 EIF1P2-201ENST00000428233 350 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 NDUFB4P10-201ENST00000452541 359 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 HSPE1P25-201ENST00000455484 251 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 Y_RNA.644-201ENST00000459006 113 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AC078817.1-201ENST00000492623 435 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 RPL30P5-201ENST00000494923 336 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AC078918.1-201ENST00000498515 228 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 Y_RNA.674-201ENST00000516362 113 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 RNU6-1282P-201ENST00000516735 96 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AC079600.2-201ENST00000550076 130 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 AC024581.2-201ENST00000619986 252 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 U2.22-201ENST00000636441 106 ntBASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LINC00116Q8NCU8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 SNORD56.1-201ENST00000362913 68 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 RNU6-774P-201ENST00000363238 107 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 RNU6-778P-201ENST00000363269 103 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 RNU6-217P-201ENST00000384164 104 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 SNORD63-201ENST00000384262 68 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 RPS4XP3-201ENST00000398541 413 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 SNRPGP7-201ENST00000469016 106 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 AF186190.1-201ENST00000517470 480 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 MIR5047-201ENST00000579212 100 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 U2.21-201ENST00000637295 81 ntBASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LINC00116Q8NCU8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LINC00116Q8NCU8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms